C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), alpha 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439174 GNA13-001 ENSG00000120063 9606 - 17:65010715-65056839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439174 12.325±0.00 8.771±0.00 1.097±0.00 5.095±1.20 7.112±0.95 9.374±1.93 3.641±1.98 4.532±2.00 5.295±3.10 10.869±5.08 11.031±0.00 4.067±1.99 5.555±0.84 5.185±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UC CIL_0007UC_0001 VISTA 17:64865144-65468148
CIL_0003AK CIL_0003AK_0002 CGP 17:65010715-65227703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001569 IEA patterning of blood vessels
GO:0001701 IEA in utero embryonic development
GO:0003924 IBA:IEA GTPase activity
GO:0004871 IBA:IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005834 IBA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0006928 TAS cellular component movement
GO:0007165 TAS:IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007189 IBA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007266 IBA Rho protein signal transduction
GO:0007596 TAS blood coagulation
GO:0008360 IEA regulation of cell shape
GO:0016020 IDA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0030154 IEA cell differentiation
GO:0030168 TAS platelet activation
GO:0030334 IEA regulation of cell migration
GO:0031526 IBA brush border membrane
GO:0031584 IBA activation of phospholipase D activity
GO:0031683 IBA:IEA G-protein beta/gamma-subunit complex binding
GO:0031702 IBA type 1 angiotensin receptor binding
GO:0031752 IBA D5 dopamine receptor binding
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020930 Gna13-001 protein_coding Mus_musculus 0 1855
ENSMUST00000106702 Gna13-002 protein_coding Mus_musculus 0 874
ENSDART00000050332 gna12a-001 protein_coding Danio_rerio 2e-25 122

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