C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045947-ENSDARG00000063347 CGP 7955 12:5058011-5155903
GeneTranscriptPositionBiotype
ENSDARG00000045947 (HRC)
histidine rich calcium binding protein 		ENSDART00000067534 (HRC-201) 5058011-5064488 protein_coding
ENSDART00000152168 (HRC-001) 5058339-5069419 protein_coding
ENSDARG00000063347 (TRPM4 (2 of 3))
transient receptor potential cation channel, subfamily M, member 4 		ENSDART00000092492 (TRPM4 (2 of 3)-201) 5077023-5155903 protein_coding
ENSDART00000152314 (TRPM4 (2 of 3)-001) 5092239-5105139 protein_coding
ENSDART00000152447 (TRPM4 (2 of 3)-002) 5078808-5089543 protein_coding
CIL_0003AT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130528-ENSG00000130529 CGP 9606 19:49151198-49211836
GeneTranscriptPositionBiotype
ENSG00000130528 (HRC)
histidine rich calcium binding protein 		ENST00000252825 (HRC-001) 49151198-49155424 protein_coding
ENST00000595167 (HRC-004) 49151955-49153307 retained_intron
ENST00000595625 (HRC-002) 49151289-49155243 protein_coding
ENST00000598858 (HRC-003) 49151199-49153435 protein_coding
ENSG00000130529 (TRPM4)
transient receptor potential cation channel, subfamily M, member 4 		ENST00000252826 (TRPM4-001) 49157741-49211836 protein_coding
ENST00000427978 (TRPM4-006) 49157815-49211680 protein_coding
ENST00000594568 (TRPM4-010) 49167644-49168337 retained_intron
ENST00000595071 (TRPM4-008) 49182526-49211836 retained_intron
ENST00000595519 (TRPM4-003) 49157792-49211836 nonsense_mediated_decay
ENST00000595882 (TRPM4-012) 49188868-49196716 retained_intron
ENST00000596338 (TRPM4-007) 49157832-49211749 retained_intron
ENST00000597316 (TRPM4-013) 49210734-49211834 protein_coding
ENST00000598502 (TRPM4-005) 49157832-49211749 nonsense_mediated_decay
ENST00000598691 (TRPM4-009) 49157741-49171373 protein_coding
ENST00000598697 (TRPM4-004) 49157766-49211834 nonsense_mediated_decay
ENST00000599459 (TRPM4-014) 49210601-49211400 retained_intron
ENST00000599628 (TRPM4-002) 49157792-49159921 protein_coding
ENST00000601347 (TRPM4-011) 49168627-49182755 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AT_0001ENSDARG00000045947ENSDART00000067534ENSDART00000152168ENSDARG00000063347ENSDART00000092492ENSDART00000152314ENSDART00000152447CIL_0003AT_0002ENSG00000130528ENST00000252825ENST00000595167ENST00000595625ENST00000598858ENSG00000130529ENST00000252826ENST00000427978ENST00000594568ENST00000595071ENST00000595519ENST00000595882ENST00000596338ENST00000597316ENST00000598502ENST00000598691ENST00000598697ENST00000599459ENST00000599628ENST00000601347
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AT_0001ENSDARG00000045947ENSDART00000067534ENSDART00000152168ENSDARG00000063347ENSDART00000092492ENSDART00000152314ENSDART00000152447CIL_0003AT_0002ENSG00000130528ENST00000252825ENST00000595625ENST00000598858ENSG00000130529ENST00000252826ENST00000427978ENST00000595071ENST00000595519ENST00000595882ENST00000596338ENST00000597316ENST00000598502ENST00000598691ENST00000598697ENST00000599459ENST00000599628ENST00000601347
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045947 ENSDART00000067534 N/A N/A N/A 0.893±0.52 N/A N/A 42.387±10.02 3.444±1.01 0.335±0.00 N/A 1.569±0.00 N/A N/A N/A
ENSDART00000152168 N/A N/A N/A 0.401±0.19 N/A N/A 80.224±2.20 4.447±2.28 0.049±0.00 N/A 1.086±0.00 N/A N/A N/A
ENSDARG00000063347 ENSDART00000092492 N/A N/A N/A 0.037±0.01 N/A N/A 0.058±0.00 0.648±0.00 0.025±0.00 N/A N/A N/A N/A N/A
ENSDART00000152314 N/A N/A N/A 0.087±0.00 N/A N/A 0.042±0.00 0.288±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000152447 N/A N/A N/A 0.037±0.00 N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130528 ENST00000252825 1.843±0.00 2.191±0.00 0.210±0.00 0.432±0.30 6.590±0.00 2.992±0.00 110.093±83.22 1.022±0.90 0.505±0.00 0.952±0.79 120.442±107.58 1.243±0.92 1.467±0.99 3.601±3.55
ENST00000595167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595625 N/A N/A N/A N/A 0.094±0.00 N/A 47.354±0.00 N/A 0.192±0.00 N/A N/A 0.038±0.00 N/A 0.246±0.00
ENST00000598858 N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00 1.467±0.00 N/A N/A N/A N/A
ENSG00000130529 ENST00000252826 6.266±0.00 2.438±0.00 0.447±0.00 0.703±0.00 5.122±2.82 N/A N/A 9.006±0.00 0.504±0.00 6.600±0.00 0.726±0.00 2.124±0.00 7.182±2.20 1.491±0.00
ENST00000427978 N/A N/A 1.418±0.00 0.993±0.00 1.301±0.00 3.213±0.00 0.391±0.00 0.228±0.00 N/A N/A N/A 1.041±0.21 1.424±0.00 2.380±0.00
ENST00000594568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595071 N/A N/A 0.546±0.00 N/A N/A N/A N/A N/A 0.732±0.07 N/A N/A 0.488±0.00 N/A 2.049±0.00
ENST00000595519 N/A N/A N/A N/A N/A 2.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595882 N/A N/A N/A N/A N/A N/A N/A 1.653±0.00 N/A N/A N/A N/A N/A N/A
ENST00000596338 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.507±0.00 N/A 1.351±0.00 N/A N/A
ENST00000597316 N/A N/A N/A N/A N/A N/A N/A N/A 6.033±0.00 N/A N/A N/A N/A N/A
ENST00000598502 1.851±0.00 3.335±0.00 N/A N/A N/A N/A 0.703±0.00 N/A N/A 0.446±0.00 N/A 0.942±0.00 N/A N/A
ENST00000598691 N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000598697 N/A N/A N/A 0.856±0.00 2.549±0.00 4.282±0.00 0.426±0.18 N/A 0.533±0.00 N/A N/A 2.674±0.00 N/A 1.631±0.00
ENST00000599459 N/A N/A N/A N/A N/A N/A N/A N/A 3.253±0.00 N/A N/A N/A N/A N/A
ENST00000599628 N/A 1.866±0.00 N/A 0.496±0.00 N/A N/A 1.027±0.70 3.061±2.67 0.904±0.00 1.120±0.00 1.269±0.00 0.347±0.00 N/A N/A
ENST00000601347 N/A N/A 3.384±0.00 N/A N/A 19.867±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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