C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252826 TRPM4-001 ENSG00000130529 9606 + 19:49157741-49211836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252826
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252826 6.266±0.00 2.438±0.00 0.447±0.00 0.703±0.00 5.122±2.82 9.006±0.00 0.504±0.00 6.600±0.00 0.726±0.00 2.124±0.00 7.182±2.20 1.491±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AT CIL_0003AT_0002 CGP 19:49151198-49211836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002407 ISS dendritic cell chemotaxis
GO:0002724 IDA regulation of T cell cytokine production
GO:0005216 IEA ion channel activity
GO:0005227 ISS calcium activated cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0008284 IDA positive regulation of cell proliferation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016925 IDA protein sumoylation
GO:0034220 TAS ion transmembrane transport
GO:0042310 IEA vasoconstriction
GO:0042391 IEA regulation of membrane potential
GO:0055085 TAS:IEA transmembrane transport
GO:0061337 IEA cardiac conduction
GO:0070588 TAS calcium ion transmembrane transport
GO:0090263 IDA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042194 Trpm4-201 protein_coding Mus_musculus 0 2813

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