C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003CK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055349-ENSDARG00000027129 CGP 7955 10:32032870-32246226
GeneTranscriptPositionBiotype
ENSDARG00000027129 (tmem218)
transmembrane protein 218 		ENSDART00000039146 (tmem218-201) 32235433-32246226 protein_coding
ENSDART00000140988 (tmem218-001) 32234967-32242325 protein_coding
ENSDART00000143387 (tmem218-002) 32235068-32242325 protein_coding
ENSDARG00000055349 (pknox2)
pbx/knotted 1 homeobox 2 		ENSDART00000004553 (pknox2-201) 32032875-32188055 protein_coding
ENSDART00000134866 (pknox2-001) 32032870-32232869 protein_coding
ENSDART00000138445 (pknox2-002) 32033667-32117065 processed_transcript
CIL_0003CK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035934-ENSMUSG00000032121 CGP 10090 9:36890982-37223210
GeneTranscriptPositionBiotype
ENSMUSG00000032121 (Tmem218)
transmembrane protein 218 		ENSMUST00000034632 (Tmem218-201) 37208333-37223210 protein_coding
ENSMUSG00000035934 (Pknox2)
Pbx/knotted 1 homeobox 2 		ENSMUST00000039674 (Pknox2-001) 36890982-37147289 protein_coding
ENSMUST00000080754 (Pknox2-201) 36890985-37147314 protein_coding
ENSMUST00000175938 (Pknox2-005) 36892478-36968490 nonsense_mediated_decay
ENSMUST00000176562 (Pknox2-004) 36922343-37083279 retained_intron
ENSMUST00000176622 (Pknox2-003) 36934654-37083279 retained_intron
ENSMUST00000177080 (Pknox2-006) 36892642-37083279 processed_transcript
ENSMUST00000177218 (Pknox2-002) 36890982-37083309 protein_coding
ENSMUST00000177444 (Pknox2-007) 36936426-37083279 protein_coding
ENSMUST00000188057 (Pknox2-008) 36936455-37147322 protein_coding
ENSMUST00000188348 (Pknox2-010) 36936439-37137567 protein_coding
ENSMUST00000188433 (Pknox2-009) 36987178-37147266 processed_transcript
ENSMUST00000189294 (Pknox2-011) 36954772-37145660 protein_coding
ENSMUSG00000093721 (Gm3896)
predicted gene 3896 		ENSMUST00000176020 (Gm3896-001) 37015758-37020671 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CK_0001ENSDARG00000027129ENSDART00000039146ENSDART00000140988ENSDART00000143387ENSDARG00000055349ENSDART00000004553ENSDART00000134866ENSDART00000138445CIL_0003CK_0002ENSMUSG00000032121ENSMUST00000034632ENSMUSG00000035934ENSMUST00000039674ENSMUST00000080754ENSMUST00000175938ENSMUST00000176562ENSMUST00000176622ENSMUST00000177080ENSMUST00000177218ENSMUST00000177444ENSMUST00000188057ENSMUST00000188348ENSMUST00000188433ENSMUST00000189294ENSMUSG00000093721ENSMUST00000176020
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CK_0001ENSDARG00000027129ENSDART00000039146ENSDART00000140988ENSDARG00000055349ENSDART00000004553ENSDART00000134866ENSDART00000138445CIL_0003CK_0002ENSMUSG00000032121ENSMUST00000034632ENSMUSG00000035934ENSMUST00000039674ENSMUST00000080754ENSMUST00000175938ENSMUST00000176562ENSMUST00000176622ENSMUST00000177080ENSMUST00000177218ENSMUST00000188057ENSMUST00000188348ENSMUSG00000093721ENSMUST00000176020
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027129 ENSDART00000039146 N/A N/A N/A 1.447±0.00 N/A N/A 1.045±0.43 0.471±0.07 0.095±0.00 N/A 0.174±0.00 N/A N/A N/A
ENSDART00000140988 N/A N/A N/A 3.267±0.00 N/A N/A 1.606±0.00 2.787±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000143387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055349 ENSDART00000004553 N/A N/A N/A 4.212±0.00 N/A N/A 0.561±0.00 0.222±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134866 N/A N/A N/A 9.835±0.00 N/A N/A 0.998±0.71 N/A 0.042±0.00 N/A 4.754±0.00 N/A N/A N/A
ENSDART00000138445 N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032121 ENSMUST00000034632 5.704±1.94 5.663±0.97 3.466±0.08 2.832±0.49 4.059±1.11 4.631±0.83 6.143±1.20 5.004±0.75 3.309±0.94 5.461±0.85 2.959±0.46 14.754±3.48 11.842±5.81 6.111±2.14
ENSMUSG00000035934 ENSMUST00000039674 4.800±4.14 0.323±0.15 3.619±0.09 8.435±3.78 1.658±1.54 0.882±0.29 2.311±0.33 1.587±0.44 0.105±0.04 7.208±3.01 8.584±1.19 9.349±3.48 0.696±0.29 15.022±9.00
ENSMUST00000080754 0.716±0.00 N/A 1.820±0.08 1.810±0.44 1.200±0.00 N/A 0.994±0.03 N/A 0.091±0.00 N/A 1.459±0.00 1.436±0.00 0.479±0.17 N/A
ENSMUST00000175938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.083±0.00
ENSMUST00000176562 N/A 0.479±0.00 N/A N/A N/A 0.515±0.00 N/A N/A 0.044±0.01 N/A N/A N/A N/A N/A
ENSMUST00000176622 N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177080 N/A 0.252±0.00 N/A 2.869±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177218 2.418±1.80 0.503±0.20 N/A N/A 0.749±0.36 0.800±0.44 0.915±0.03 0.760±0.24 0.080±0.02 2.940±1.04 N/A 4.095±1.86 0.169±0.00 N/A
ENSMUST00000177444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188057 N/A 1.290±0.33 N/A N/A 2.574±0.57 2.424±0.00 N/A N/A 0.470±0.00 N/A N/A 31.663±2.79 N/A N/A
ENSMUST00000188348 N/A N/A N/A N/A 0.858±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093721 ENSMUST00000176020 0.036±0.04 N/A 0.029±0.03 0.040±0.00 0.014±0.00 0.016±0.00 0.026±0.00 0.015±0.00 0.003±0.00 0.102±0.02 N/A 0.055±0.04 0.025±0.00 N/A

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