C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Pbx/knotted 1 homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177080 Pknox2-006 ENSMUSG00000035934 10090 - 9:36892642-37083279 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainENSMUST00000177080
Transcript ID Adrenal Brain
ENSMUST00000177080 0.252±0.00 2.869±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080D CIL_00080D_0002 VISTA 9:36753339-37355278
CIL_0003CK CIL_0003CK_0002 CGP 9:36890982-37223210

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298282 PKNOX2-001 protein_coding Homo_sapiens 0 2226
ENST00000526955 PKNOX2-006 retained_intron Homo_sapiens 0 1070
ENST00000530517 PKNOX2-002 processed_transcript Homo_sapiens 0 2213
ENST00000531116 PKNOX2-004 processed_transcript Homo_sapiens 0 2242
ENST00000532623 PKNOX2-003 nonsense_mediated_decay Homo_sapiens 0 1999
ENST00000557814 PKNOX2-015 processed_transcript Homo_sapiens 0 298
ENST00000558705 PKNOX2-012 protein_coding Homo_sapiens 0 318
ENST00000558729 PKNOX2-009 processed_transcript Homo_sapiens 0 198
ENST00000559662 PKNOX2-014 processed_transcript Homo_sapiens 0 198
ENST00000561298 PKNOX2-013 retained_intron Homo_sapiens 0 490

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