C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003CV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073752-ENSDARG00000063316 CGP 7955 18:9186038-9400048
GeneTranscriptPositionBiotype
ENSDARG00000063316 (HGF (2 of 2))
hepatocyte growth factor (hepapoietin A; scatter factor) 		ENSDART00000092421 (HGF (2 of 2)-201) 9365832-9400048 protein_coding
ENSDARG00000073752 (CACNA2D1 (3 of 3))
calcium channel, voltage-dependent, alpha 2/delta subunit 1 		ENSDART00000080995 (CACNA2D1 (3 of 3)-201) 9186038-9329339 protein_coding
ENSDART00000143965 (CACNA2D1 (3 of 3)-001) 9264475-9274132 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003CV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040118-ENSMUSG00000028864 CGP 10090 5:15934691-16619439
GeneTranscriptPositionBiotype
ENSMUSG00000028864 (Hgf)
hepatocyte growth factor 		ENSMUST00000030683 (Hgf-201) 16553550-16619439 protein_coding
ENSMUSG00000040118 (Cacna2d1)
calcium channel, voltage-dependent, alpha2/delta subunit 1 		ENSMUST00000039370 (Cacna2d1-201) 15934691-16374511 protein_coding
ENSMUST00000078272 (Cacna2d1-202) 15934691-16374511 protein_coding
ENSMUST00000101581 (Cacna2d1-203) 15934691-16374511 protein_coding
ENSMUST00000115281 (Cacna2d1-204) 15934829-16370727 protein_coding
ENSMUST00000167946 (Cacna2d1-205) 15934691-16374511 protein_coding
ENSMUST00000180204 (Cacna2d1-206) 15934691-16374511 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CV_0001ENSDARG00000063316ENSDART00000092421ENSDARG00000073752ENSDART00000080995ENSDART00000143965CIL_0003CV_0002ENSMUSG00000028864ENSMUST00000030683ENSMUSG00000040118ENSMUST00000039370ENSMUST00000078272ENSMUST00000101581ENSMUST00000115281ENSMUST00000167946ENSMUST00000180204
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003CV_0001ENSDARG00000063316ENSDART00000092421ENSDARG00000073752ENSDART00000080995ENSDART00000143965CIL_0003CV_0002ENSMUSG00000028864ENSMUST00000030683ENSMUSG00000040118ENSMUST00000039370ENSMUST00000078272ENSMUST00000101581ENSMUST00000115281ENSMUST00000180204
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063316 ENSDART00000092421 N/A N/A N/A 0.247±0.14 N/A N/A 0.046±0.01 N/A 0.870±0.00 N/A N/A N/A N/A N/A
ENSDARG00000073752 ENSDART00000080995 N/A N/A N/A 0.794±0.37 N/A N/A N/A 0.130±0.01 N/A N/A 0.079±0.00 N/A N/A N/A
ENSDART00000143965 N/A N/A N/A 3.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028864 ENSMUST00000030683 N/A 0.251±0.05 0.432±0.00 0.056±0.00 0.873±0.69 0.447±0.17 0.147±0.04 0.235±0.09 0.887±0.82 1.361±0.76 0.022±0.01 0.872±0.28 0.259±0.07 0.259±0.01
ENSMUSG00000040118 ENSMUST00000039370 N/A 2.718±0.00 N/A N/A 6.482±0.56 N/A N/A N/A N/A 1.163±0.00 40.372±6.22 N/A N/A N/A
ENSMUST00000078272 2.208±1.45 7.643±1.81 6.332±0.00 N/A 1.024±0.09 0.983±0.26 N/A 0.370±0.03 0.083±0.05 2.555±0.31 N/A 3.687±0.72 0.085±0.05 0.117±0.01
ENSMUST00000101581 N/A N/A N/A 15.970±2.43 0.688±0.00 0.674±0.20 2.028±0.00 0.704±0.00 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000115281 3.189±0.27 10.492±4.17 N/A 18.802±0.00 0.385±0.00 1.142±0.55 N/A N/A 0.052±0.03 0.748±0.00 N/A 3.325±0.99 0.157±0.08 0.719±0.25
ENSMUST00000167946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180204 N/A 8.087±3.72 5.201±2.52 3.574±1.61 1.205±0.13 0.779±0.27 5.107±1.62 0.687±0.00 0.042±0.01 0.880±0.00 N/A 4.629±1.25 N/A N/A

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