C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small VCP/p97-interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354193 SVIP-001 ENSG00000198168 9606 - 11:22818929-22829865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354193 0.198±0.00 1.886±0.00 1.042±0.00 3.497±1.02 0.476±0.01 1.776±0.00 0.649±0.07 1.389±0.19 0.477±0.05 1.281±0.57 0.566±0.25 1.246±0.36 0.288±0.15 2.050±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088G CIL_00088G_0001 VISTA 11:22474995-23077197
CIL_0000L8 CIL_0000L8_0001 CGP 11:22625642-22830299
CIL_0003FW CIL_0003FW_0001 CGP 11:22813799-22860426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000836 IDA Hrd1p ubiquitin ligase complex
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0010508 IMP positive regulation of autophagy
GO:0031333 IMP negative regulation of protein complex assembly
GO:0043621 IMP protein self-association
GO:0070062 IDA extracellular vesicular exosome
GO:1903061 IMP positive regulation of protein lipidation
GO:1903070 IMP negative regulation of ER-associated ubiquitin-dependent protein catabolic process

Homologs

No Homologs available.

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