C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003J2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184209-ENSG00000188026 CGP 9606 12:123457641-123533718
GeneTranscriptPositionBiotype
ENSG00000184209 (SNRNP35)
small nuclear ribonucleoprotein 35kDa (U11/U12) 		ENST00000350887 (SNRNP35-003) 123464506-123466390 protein_coding
ENST00000412157 (SNRNP35-002) 123459523-123466299 protein_coding
ENST00000526639 (SNRNP35-001) 123457641-123466936 protein_coding
ENST00000527158 (SNRNP35-004) 123458119-123473154 processed_transcript
ENST00000529201 (SNRNP35-007) 123458127-123464899 processed_transcript
ENST00000529904 (SNRNP35-005) 123458088-123459216 processed_transcript
ENSG00000188026 (RILPL1)
Rab interacting lysosomal protein-like 1 		ENST00000340724 (RILPL1-003) 123472068-123514428 protein_coding
ENST00000376874 (RILPL1-001) 123470054-123533718 protein_coding
ENST00000544468 (RILPL1-004) 123472167-123484974 protein_coding
ENSG00000274427 (RP11-972P1.10)
 ENST00000610631 (RP11-972P1.10-001) 123515275-123515513 sense_intronic
ENSG00000278112 (RP11-972P1.11)
 ENST00000615987 (RP11-972P1.11-001) 123519390-123519856 sense_intronic
ENSG00000280328 (RP11-972P1.7)
 ENST00000623184 (RP11-972P1.7-001) 123472200-123476093 TEC
CIL_0003J2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029402-ENSMUSG00000029392 CGP 10090 5:124483134-124531391
GeneTranscriptPositionBiotype
ENSMUSG00000029392 (Rilpl1)
Rab interacting lysosomal protein-like 1 		ENSMUST00000062153 (Rilpl1-201) 124493082-124531391 protein_coding
ENSMUSG00000029402 (Snrnp35)
small nuclear ribonucleoprotein 35 (U11/U12) 		ENSMUST00000031349 (Snrnp35-001) 124483134-124491124 protein_coding
ENSMUST00000111453 (Snrnp35-002) 124483458-124491107 protein_coding
ENSMUST00000136567 (Snrnp35-003) 124483202-124490490 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J2_0001ENSG00000184209ENST00000350887ENST00000412157ENST00000526639ENST00000527158ENST00000529201ENST00000529904ENSG00000188026ENST00000340724ENST00000376874ENST00000544468ENSG00000274427ENST00000610631ENSG00000278112ENST00000615987ENSG00000280328ENST00000623184CIL_0003J2_0002ENSMUSG00000029392ENSMUST00000062153ENSMUSG00000029402ENSMUST00000031349ENSMUST00000111453ENSMUST00000136567
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J2_0001ENSG00000184209ENST00000350887ENST00000526639ENSG00000188026ENST00000340724ENST00000376874ENST00000544468ENSG00000274427ENST00000610631ENSG00000278112ENST00000615987ENSG00000280328ENST00000623184CIL_0003J2_0002ENSMUSG00000029392ENSMUST00000062153ENSMUSG00000029402ENSMUST00000031349ENSMUST00000111453ENSMUST00000136567
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000184209 ENST00000350887 10.624±0.00 24.771±0.00 N/A 14.418±0.00 18.277±0.00 11.635±0.00 14.911±0.00 14.375±0.00 11.276±0.00 8.472±0.00 33.467±0.00 16.832±5.42 21.820±4.53 14.615±7.87
ENST00000412157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526639 N/A N/A N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.601±0.00
ENST00000527158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188026 ENST00000340724 N/A N/A N/A 1.754±0.00 N/A N/A N/A N/A N/A N/A N/A 0.645±0.00 N/A 2.057±0.00
ENST00000376874 2.145±0.00 3.746±0.00 0.357±0.00 2.122±0.27 1.423±1.02 3.517±0.00 5.862±4.90 1.092±0.74 1.126±0.60 0.536±0.00 8.468±4.40 2.872±1.69 7.391±1.54 2.488±0.00
ENST00000544468 N/A N/A N/A N/A N/A N/A 25.792±0.00 N/A N/A 4.398±0.00 N/A 2.109±0.00 N/A N/A
ENSG00000274427 ENST00000610631 0.119±0.00 0.298±0.00 N/A 0.729±0.00 0.992±0.42 0.272±0.00 0.227±0.00 1.044±0.00 0.248±0.00 2.197±1.65 0.575±0.00 5.469±6.95 0.760±0.20 0.251±0.12
ENSG00000278112 ENST00000615987 0.275±0.00 0.831±0.00 0.122±0.00 0.250±0.10 0.485±0.00 0.286±0.00 0.049±0.00 0.420±0.00 N/A 0.354±0.25 0.315±0.00 0.566±0.41 0.221±0.08 0.149±0.01
ENSG00000280328 ENST00000623184 N/A N/A 0.690±0.00 1.585±0.00 0.366±0.00 0.587±0.27 N/A N/A N/A 1.042±0.13 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029392 ENSMUST00000062153 3.815±1.29 3.945±0.97 10.277±0.82 15.557±15.67 4.090±1.49 2.259±0.45 15.669±2.29 4.079±0.84 0.872±0.55 9.285±0.58 51.954±17.88 8.470±3.43 9.075±3.86 1.441±0.32
ENSMUSG00000029402 ENSMUST00000031349 2.099±0.67 0.353±0.14 2.614±0.18 6.704±3.80 0.719±0.23 1.524±0.57 1.534±0.48 1.974±0.60 3.020±2.68 2.270±0.56 8.616±1.09 2.848±3.56 12.915±7.37 12.819±7.42
ENSMUST00000111453 1.305±0.11 1.129±0.08 0.799±0.12 2.864±0.00 0.843±0.26 0.507±0.18 0.713±0.17 1.187±0.48 0.679±0.16 0.632±0.17 3.505±0.85 1.351±0.67 1.037±0.01 17.715±8.03
ENSMUST00000136567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 6.318±0.00 N/A

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