C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab interacting lysosomal protein-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062153 Rilpl1-201 ENSMUSG00000029392 10090 - 5:124493082-124531391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062153 3.815±1.29 3.945±0.97 10.277±0.82 15.557±15.67 4.090±1.49 2.259±0.45 15.669±2.29 4.079±0.84 0.872±0.55 9.285±0.58 51.954±17.88 8.470±3.43 9.075±3.86 1.441±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003J2 CIL_0003J2_0002 CGP 5:124483134-124531391
CIL_0003J9 CIL_0003J9_0002 CGP 5:124493082-124550506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003382 IMP epithelial cell morphogenesis
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0005829 ISS cytosol
GO:0005886 IEA plasma membrane
GO:0006886 IMP intracellular protein transport
GO:0072372 IDA primary cilium
GO:1901214 IMP regulation of neuron death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340724 RILPL1-003 protein_coding Homo_sapiens 0 597
ENST00000376874 RILPL1-001 protein_coding Homo_sapiens 0 1424
ENST00000527158 SNRNP35-004 processed_transcript Homo_sapiens 8.00001e-42 176
ENST00000544468 RILPL1-004 protein_coding Homo_sapiens 0 279

Loading