C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205045-ENSG00000236320 CGP 9606 17:35464249-35558098
GeneTranscriptPositionBiotype
ENSG00000205045 (SLFN12L)
schlafen family member 12-like 		ENST00000260908 (SLFN12L-004) 35473689-35487857 protein_coding
ENST00000361112 (SLFN12L-005) 35474904-35537861 protein_coding
ENST00000587436 (SLFN12L-008) 35464249-35478469 retained_intron
ENST00000590802 (SLFN12L-007) 35464257-35478226 retained_intron
ENSG00000236320 (SLFN14)
schlafen family member 14 		ENST00000415846 (SLFN14-001) 35548125-35558098 protein_coding
ENSG00000255987 (TOMM20P2)
translocase of outer mitochondrial membrane 20 homolog (yeast) pseudogene 2 		ENST00000540082 (TOMM20P2-001) 35514766-35515186 processed_pseudogene
ENSG00000267035 (RP11-1094M14.10)
 ENST00000585536 (RP11-1094M14.10-001) 35540039-35540797 lincRNA
ENSG00000267046 (RP11-1094M14.9)
 ENST00000589887 (RP11-1094M14.9-001) 35490009-35491238 processed_pseudogene
ENSG00000267074 (RP11-1094M14.5)
 ENST00000592908 (RP11-1094M14.5-001) 35499690-35510270 sense_intronic
ENSG00000267349 (RP11-686D22.9)
 ENST00000587076 (RP11-686D22.9-001) 35477994-35478444 antisense
ENSG00000267359 (RP11-1094M14.12)
 ENST00000588445 (RP11-1094M14.12-001) 35553205-35554767 antisense
ENSG00000267369 (RP11-1094M14.8)
 ENST00000587542 (RP11-1094M14.8-001) 35498218-35499175 processed_pseudogene
ENSG00000267554 (RP11-686D22.10)
 ENST00000592517 (RP11-686D22.10-001) 35470069-35470628 processed_pseudogene
CIL_0003KB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018986-ENSMUSG00000082101 CGP 10090 11:83191330-83286726
GeneTranscriptPositionBiotype
ENSMUSG00000018986 (Slfn3)
schlafen 3 		ENSMUST00000019130 (Slfn3-001) 83191330-83215154 protein_coding
ENSMUSG00000064856 (Gm23444)
predicted gene, 23444 		ENSMUST00000082922 (Gm23444-201) 83271498-83271688 snRNA
ENSMUSG00000082101 (Slfn14)
schlafen 14 		ENSMUST00000163961 (Slfn14-001) 83275110-83286726 protein_coding
ENSMUSG00000083161 (Gm11427)
predicted gene 11427 		ENSMUST00000117952 (Gm11427-001) 83254196-83260534 unprocessed_pseudogene
ENSMUSG00000087107 (AI662270)
expressed sequence AI662270 		ENSMUST00000142709 (AI662270-003) 83224149-83224593 lincRNA
ENSMUST00000143673 (AI662270-001) 83223576-83226604 lincRNA
ENSMUST00000145461 (AI662270-002) 83223576-83225869 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KB_0001ENSG00000205045ENST00000260908ENST00000361112ENST00000587436ENST00000590802ENSG00000236320ENST00000415846ENSG00000255987ENST00000540082ENSG00000267035ENST00000585536ENSG00000267046ENST00000589887ENSG00000267074ENST00000592908ENSG00000267349ENST00000587076ENSG00000267359ENST00000588445ENSG00000267369ENST00000587542ENSG00000267554ENST00000592517CIL_0003KB_0002ENSMUSG00000018986ENSMUST00000019130ENSMUSG00000064856ENSMUST00000082922ENSMUSG00000082101ENSMUST00000163961ENSMUSG00000083161ENSMUST00000117952ENSMUSG00000087107ENSMUST00000142709ENSMUST00000143673ENSMUST00000145461
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KB_0001ENSG00000205045ENST00000260908ENST00000361112ENST00000587436ENST00000590802ENSG00000236320ENST00000415846ENSG00000255987ENST00000540082ENSG00000267035ENST00000585536ENSG00000267046ENST00000589887ENSG00000267074ENST00000592908ENSG00000267349ENST00000587076ENSG00000267359ENST00000588445ENSG00000267369ENST00000587542ENSG00000267554ENST00000592517CIL_0003KB_0002ENSMUSG00000018986ENSMUST00000019130ENSMUSG00000064856ENSMUST00000082922ENSMUSG00000082101ENSMUST00000163961ENSMUSG00000083161ENSMUST00000117952ENSMUSG00000087107ENSMUST00000142709ENSMUST00000143673ENSMUST00000145461
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000205045 ENST00000260908 0.113±0.00 N/A 0.035±0.00 N/A N/A 0.345±0.26 0.137±0.00 0.111±0.00 0.093±0.00 0.338±0.17 0.028±0.00 0.170±0.09 N/A 0.109±0.01
ENST00000361112 0.056±0.00 N/A N/A 0.059±0.00 N/A 0.187±0.00 0.103±0.01 N/A 0.079±0.00 0.953±0.64 0.013±0.00 0.084±0.03 0.055±0.03 N/A
ENST00000587436 N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A 0.406±0.00 0.091±0.00 0.226±0.00 0.064±0.02 0.314±0.11
ENST00000590802 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236320 ENST00000415846 0.025±0.00 0.126±0.00 N/A N/A 0.025±0.00 N/A 0.042±0.00 0.013±0.00 0.056±0.00 0.120±0.02 0.139±0.00 0.021±0.01 0.039±0.00 0.092±0.04
ENSG00000255987 ENST00000540082 0.070±0.00 1.702±0.00 N/A N/A 0.521±0.30 0.098±0.03 0.400±0.00 0.444±0.00 N/A 1.640±1.01 N/A 0.312±0.22 0.184±0.08 0.373±0.01
ENSG00000267035 ENST00000585536 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A
ENSG00000267046 ENST00000589887 N/A N/A N/A N/A 1.272±0.00 N/A 0.106±0.00 N/A 0.012±0.00 N/A N/A 0.206±0.18 N/A N/A
ENSG00000267074 ENST00000592908 0.176±0.00 1.558±0.00 N/A 0.054±0.00 0.616±0.09 0.507±0.40 0.086±0.00 N/A N/A 1.254±0.18 0.011±0.00 0.159±0.04 0.128±0.03 0.158±0.08
ENSG00000267349 ENST00000587076 N/A N/A N/A N/A N/A 1.187±0.00 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000267359 ENST00000588445 N/A 0.456±0.00 N/A N/A N/A 0.630±0.00 N/A N/A N/A 0.093±0.00 N/A 0.073±0.00 0.096±0.00 N/A
ENSG00000267369 ENST00000587542 0.102±0.00 2.855±0.00 N/A 0.073±0.00 0.313±0.00 N/A 0.172±0.08 0.034±0.00 0.706±0.00 0.905±0.00 N/A 0.306±0.06 0.255±0.16 0.608±0.00
ENSG00000267554 ENST00000592517 0.095±0.00 1.438±0.00 N/A N/A 0.595±0.21 0.460±0.44 0.224±0.00 0.363±0.32 0.397±0.31 0.984±0.53 N/A 0.506±0.35 0.228±0.00 0.181±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018986 ENSMUST00000019130 0.624±0.25 0.366±0.11 N/A 0.052±0.04 0.475±0.26 0.073±0.01 0.562±0.17 0.496±0.11 1.616±0.87 0.562±0.12 0.202±0.08 0.359±0.20 0.183±0.06 0.368±0.16
ENSMUSG00000064856 ENSMUST00000082922 N/A N/A 4.107±0.00 15.260±0.13 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082101 ENSMUST00000163961 N/A N/A 0.005±0.00 0.025±0.01 N/A N/A 0.019±0.00 0.028±0.02 12.655±6.94 0.074±0.06 0.012±0.00 0.819±0.14 0.272±0.23 0.029±0.02
ENSMUSG00000083161 ENSMUST00000117952 0.144±0.04 0.097±0.00 0.288±0.00 0.029±0.00 0.214±0.10 0.193±0.08 0.033±0.01 0.082±0.03 2.925±2.78 0.294±0.15 0.052±0.02 0.164±0.04 0.611±0.46 0.035±0.02
ENSMUSG00000087107 ENSMUST00000142709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.000±0.00 N/A N/A
ENSMUST00000143673 0.465±0.01 0.590±0.00 1.834±0.61 0.014±0.00 3.863±1.45 0.664±0.27 0.210±0.00 0.545±0.22 40.060±44.04 0.495±0.19 0.128±0.05 0.359±0.23 3.152±3.05 0.110±0.07
ENSMUST00000145461 1.273±0.47 0.281±0.10 0.874±0.00 N/A 5.373±2.12 0.995±0.62 0.337±0.07 0.933±0.30 32.837±39.66 N/A 0.046±0.00 0.938±0.46 N/A 0.059±0.03

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