C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003MJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000067634-ENSDARG00000089411 CGP 7955 5:60164511-60310224
GeneTranscriptPositionBiotype
ENSDARG00000059606 (ccdc84)
coiled-coil domain containing 84 		ENSDART00000083015 (ccdc84-201) 60156223-60164937 protein_coding
ENSDART00000130319 (ccdc84-202) 60156299-60164321 protein_coding
ENSDARG00000067634 (arhgef12b)
Rho guanine nucleotide exchange factor (GEF) 12b 		ENSDART00000087610 (arhgef12b-201) 60164514-60230293 protein_coding
ENSDART00000156198 (arhgef12b-001) 60164511-60243120 protein_coding
ENSDARG00000089411 (TMEM136 (3 of 3))
transmembrane protein 136 		ENSDART00000129519 (TMEM136 (3 of 3)-201) 60304755-60310224 protein_coding
CIL_0003MJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059495-ENSMUSG00000048503 CGP 10090 9:42963842-43116570
GeneTranscriptPositionBiotype
ENSMUSG00000048503 (Tmem136)
transmembrane protein 136 		ENSMUST00000061833 (Tmem136-201) 43108653-43116570 protein_coding
ENSMUSG00000059495 (Arhgef12)
Rho guanine nucleotide exchange factor (GEF) 12 		ENSMUST00000072767 (Arhgef12-201) 42963843-43105486 protein_coding
ENSMUST00000165665 (Arhgef12-202) 42963842-43105718 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MJ_0001ENSDARG00000059606ENSDART00000083015ENSDART00000130319ENSDARG00000067634ENSDART00000087610ENSDART00000156198ENSDARG00000089411ENSDART00000129519CIL_0003MJ_0002ENSMUSG00000048503ENSMUST00000061833ENSMUSG00000059495ENSMUST00000072767ENSMUST00000165665
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003MJ_0001ENSDARG00000059606ENSDART00000083015ENSDARG00000067634ENSDART00000087610ENSDART00000156198ENSDARG00000089411ENSDART00000129519CIL_0003MJ_0002ENSMUSG00000048503ENSMUST00000061833ENSMUSG00000059495ENSMUST00000072767ENSMUST00000165665
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059606 ENSDART00000083015 N/A N/A N/A 6.546±1.93 N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A
ENSDART00000130319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000067634 ENSDART00000087610 N/A N/A N/A 2.852±2.14 N/A N/A 7.591±6.80 3.355±1.14 N/A N/A N/A N/A N/A N/A
ENSDART00000156198 N/A N/A N/A 4.781±1.35 N/A N/A 4.736±1.25 1.920±0.00 0.645±0.00 N/A 1.931±0.00 N/A N/A N/A
ENSDARG00000089411 ENSDART00000129519 N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048503 ENSMUST00000061833 1.808±0.21 3.221±0.43 2.309±0.18 4.851±2.36 1.004±0.17 0.743±0.18 2.556±0.51 5.031±0.52 0.522±0.53 2.481±0.70 0.731±0.08 5.423±1.92 6.211±4.47 0.213±0.14
ENSMUSG00000059495 ENSMUST00000072767 N/A N/A 5.051±3.23 5.499±3.78 8.753±0.00 1.342±0.09 2.131±0.00 N/A 1.359±0.58 N/A 2.558±0.95 8.720±2.79 4.923±2.47 0.874±0.54
ENSMUST00000165665 8.120±1.64 7.042±1.36 6.405±2.36 5.017±1.78 4.436±0.66 2.356±0.35 12.879±1.07 16.571±2.26 4.843±2.41 18.814±5.32 3.220±1.56 6.898±1.82 5.729±2.73 2.882±0.52

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