C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ON_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099834-ENSG00000070031 CGP 9606 11:616565-627143
GeneTranscriptPositionBiotype
ENSG00000070031 (SCT)
secretin 		ENST00000176195 (SCT-001) 626431-627143 protein_coding
ENSG00000099834 (CDHR5)
cadherin-related family member 5 		ENST00000349570 (CDHR5-002) 617256-625169 protein_coding
ENST00000358353 (CDHR5-001) 616577-626078 protein_coding
ENST00000397542 (CDHR5-201) 616565-625067 protein_coding
ENST00000526077 (CDHR5-008) 621217-624955 protein_coding
ENST00000529337 (CDHR5-010) 624213-625169 processed_transcript
ENST00000531088 (CDHR5-006) 621420-624955 protein_coding
ENST00000531177 (CDHR5-004) 617256-624932 nonsense_mediated_decay
ENST00000531899 (CDHR5-005) 619416-624955 retained_intron
ENST00000532949 (CDHR5-009) 619688-621137 processed_transcript
ENST00000534311 (CDHR5-007) 621397-624955 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003ON_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025497-ENSMUSG00000038580 CGP 10090 7:141269085-141279133
GeneTranscriptPositionBiotype
ENSMUSG00000025497 (Cdhr5)
cadherin-related family member 5 		ENSMUST00000080654 (Cdhr5-201) 141269085-141276786 protein_coding
ENSMUST00000167263 (Cdhr5-202) 141269085-141276786 protein_coding
ENSMUSG00000038580 (Sct)
secretin 		ENSMUST00000046156 (Sct-201) 141278331-141279133 protein_coding
ENSMUST00000167790 (Sct-202) 141278354-141279131 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ON_0001ENSG00000070031ENST00000176195ENSG00000099834ENST00000349570ENST00000358353ENST00000397542ENST00000526077ENST00000529337ENST00000531088ENST00000531177ENST00000531899ENST00000532949ENST00000534311CIL_0003ON_0002ENSMUSG00000025497ENSMUST00000080654ENSMUST00000167263ENSMUSG00000038580ENSMUST00000046156ENSMUST00000167790
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ON_0001ENSG00000070031ENST00000176195ENSG00000099834ENST00000349570ENST00000358353ENST00000397542ENST00000531088ENST00000531177ENST00000531899ENST00000532949ENST00000534311CIL_0003ON_0002ENSMUSG00000025497ENSMUST00000080654ENSMUST00000167263ENSMUSG00000038580ENSMUST00000046156ENSMUST00000167790
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070031 ENST00000176195 N/A N/A N/A 0.557±0.00 N/A 0.420±0.00 N/A 0.779±0.00 N/A 1.489±0.00 N/A 0.290±0.00 0.521±0.12 0.366±0.00
ENSG00000099834 ENST00000349570 N/A N/A N/A N/A N/A N/A N/A N/A 10.938±0.00 0.029±0.00 N/A 1.554±1.12 N/A N/A
ENST00000358353 N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397542 N/A N/A 4.129±0.00 0.016±0.00 1.713±0.00 3.711±1.55 0.032±0.00 6.713±3.20 12.048±11.91 N/A N/A 1.694±1.41 N/A 0.215±0.00
ENST00000526077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.191±0.00 0.089±0.00 N/A
ENST00000531177 N/A N/A N/A N/A N/A N/A 0.024±0.00 11.708±0.00 N/A N/A N/A 1.225±0.00 0.029±0.00 0.077±0.00
ENST00000531899 N/A N/A N/A N/A N/A 3.097±0.00 N/A 15.996±0.00 N/A 0.068±0.00 N/A N/A N/A N/A
ENST00000532949 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.00
ENST00000534311 N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A N/A N/A 3.987±0.00 0.070±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025497 ENSMUST00000080654 0.081±0.04 4.066±1.17 0.004±0.00 0.010±0.00 0.173±0.12 77.146±21.01 0.015±0.01 19.114±2.84 3.944±3.91 0.251±0.23 0.043±0.02 0.456±0.31 3.967±0.82 0.253±0.03
ENSMUST00000167263 0.033±0.02 1.654±1.03 0.012±0.00 0.017±0.00 0.089±0.04 93.412±14.74 N/A 18.818±3.84 3.073±2.18 0.221±0.10 N/A 0.422±0.35 4.448±2.72 0.115±0.06
ENSMUSG00000038580 ENSMUST00000046156 0.191±0.04 N/A 0.045±0.00 N/A 0.159±0.00 N/A N/A N/A N/A N/A N/A 0.909±0.02 348.129±230.24 1.013±0.00
ENSMUST00000167790 0.594±0.23 0.363±0.21 0.307±0.18 0.820±0.31 0.732±0.39 51.551±19.26 N/A 0.914±0.25 0.213±0.21 0.134±0.04 N/A 3.889±1.84 1207.438±326.52 2.133±0.62

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