C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin-related family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397542 CDHR5-201 ENSG00000099834 9606 - 11:616565-625067 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverOvaryTestisENST00000397542
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000397542 4.129±0.00 0.016±0.00 1.713±0.00 3.711±1.55 0.032±0.00 6.713±3.20 12.048±11.91 1.694±1.41 0.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OO CIL_0003OO_0001 CGP 11:612553-626078
CIL_0003ON CIL_0003ON_0001 CGP 11:616565-627143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 ISS:IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007155 ISS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008013 IPI beta-catenin binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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