C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coagulation factor XIII, A1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037491 F13a1-201 ENSMUSG00000039109 10090 - 13:36867178-37049213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037491 15.921±2.32 1.330±0.20 13.487±0.89 0.873±0.48 21.926±2.32 3.265±0.68 4.701±0.46 0.829±0.15 3.517±2.15 4.422±0.56 1.540±0.50 2.547±0.50 3.454±3.41 0.696±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SA CIL_0003SA_0002 CGP 13:36725625-37050244
CIL_0003S9 CIL_0003S9_0002 CGP 13:36867178-37419036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IMP protein-glutamine gamma-glutamyltransferase activity
GO:0005737 IEA cytoplasm
GO:0007596 IMP blood coagulation
GO:0018149 IMP peptide cross-linking
GO:0046872 IEA metal ion binding
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264870 F13A1-001 protein_coding Homo_sapiens 0 2590
ENST00000414279 F13A1-003 protein_coding Homo_sapiens 0 398
ENST00000431222 F13A1-004 protein_coding Homo_sapiens 0 381
ENST00000445223 F13A1-002 protein_coding Homo_sapiens 0 303
ENST00000451619 F13A1-006 protein_coding Homo_sapiens 0 291
ENST00000479211 F13A1-005 retained_intron Homo_sapiens 0 486

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