C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 2, 26kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382848 GJB2-001 ENSG00000165474 9606 - 13:20187470-20192898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382848
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382848 0.221±0.00 0.437±0.00 0.779±0.00 0.556±0.07 0.725±0.07 2.523±1.14 0.080±0.00 5.023±0.45 4.191±3.85 0.543±0.47 0.076±0.06 11.564±11.30 0.388±0.28 1.091±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SK CIL_0003SK_0001 CGP 13:20138255-20192898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005793 TAS endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 TAS plasma membrane
GO:0005922 IEA connexon complex
GO:0006810 TAS transport
GO:0007605 IEA sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0016264 TAS gap junction assembly
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055698 Gjb2-001 protein_coding Mus_musculus 0 924

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