C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000041311 stx8 7955 - 6:18123023-18236139 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000060547 stx8-001 18123023-18236139 protein_coding
  ENSDART00000146442 stx8-002 18123074-18135403 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000060547ENSDART00000146442
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000060547 9.285±1.22 6.030±1.96 6.866±0.97 0.432±0.00 4.189±0.00
ENSDART00000146442 8.250±1.95 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LN CIL_0001LN_0001 CGP 6:17998946-18236139
CIL_0003SO CIL_0003SO_0001 CGP 6:18123023-18257984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005484 IBA SNAP receptor activity
GO:0005515 IEA protein binding
GO:0006886 IBA intracellular protein transport
GO:0006906 IBA vesicle fusion
GO:0016021 IBA integral to membrane
GO:0031201 IBA SNARE complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170310 STX8 syntaxin 8 protein_coding Homo_sapiens
ENSMUSG00000020903 Stx8 syntaxin 8 protein_coding Mus_musculus

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