C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003T2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156006-ENSG00000156011 CGP 9606 8:18391245-19084730
GeneTranscriptPositionBiotype
ENSG00000156006 (NAT2)
N-acetyltransferase 2 (arylamine N-acetyltransferase)
ENST00000286479 (NAT2-001) 18391245-18401218 protein_coding
ENST00000520116 (NAT2-002) 18391287-18400993 protein_coding
ENSG00000187229 (RP11-161I2.1)
ENST00000524252 (RP11-161I2.1-001) 18720905-18734405 antisense
ENSG00000201157 (SNORA62)
Small nucleolar RNA SNORA62/SNORA6 family
ENST00000364287 (SNORA62.1-201) 18979619-18979772 snoRNA
ENSG00000251963 (AC090420.1)
ENST00000516154 (AC090420.1-201) 18809500-18809626 miRNA
ENSG00000253335 (RP11-420B22.1)
ENST00000522670 (RP11-420B22.1-001) 18989279-19000952 antisense
ENSG00000270255 (RP11-420B22.2)
ENST00000603110 (RP11-420B22.2-001) 19001627-19001950 processed_pseudogene
ENSG00000274368 (AC100800.1)
ENST00000584892 (AC100800.1-201) 18582843-18582943 miRNA
ENSG00000278886 (RP11-108A14.1)
ENST00000623639 (RP11-108A14.1-001) 18864681-18865247 TEC
CIL_0003T2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056426-ENSMUSG00000030465 CGP 10090 8:67523854-68062286
GeneTranscriptPositionBiotype
ENSMUSG00000030465 (Psd3)
pleckstrin and Sec7 domain containing 3
ENSMUST00000038959 (Psd3-201) 67689082-67974574 protein_coding
ENSMUST00000059374 (Psd3-005) 67711526-67818233 protein_coding
ENSMUST00000093468 (Psd3-002) 67696881-67910932 protein_coding
ENSMUST00000093469 (Psd3-003) 67696047-67974574 protein_coding
ENSMUST00000098696 (Psd3-202) 67689082-67974574 protein_coding
ENSMUST00000120071 (Psd3-004) 67689089-67818295 protein_coding
ENSMUST00000145595 (Psd3-006) 67903648-67951879 retained_intron
ENSMUST00000146480 (Psd3-007) 67878278-67904120 processed_transcript
ENSMUST00000150169 (Psd3-001) 67790470-68062286 retained_intron
ENSMUSG00000056426 (Nat3)
N-acetyltransferase 3
ENSMUST00000070514 (Nat3-201) 67523854-67548627 protein_coding
ENSMUSG00000077545 (Gm22018)
predicted gene, 22018
ENSMUST00000104357 (Gm22018-201) 68010340-68010470 snoRNA
ENSMUSG00000086883 (Gm15992)
predicted gene 15992
ENSMUST00000130307 (Gm15992-001) 67810985-67811374 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T2_0001ENSG00000156006ENST00000286479ENST00000520116ENSG00000187229ENST00000524252ENSG00000201157ENST00000364287ENSG00000251963ENST00000516154ENSG00000253335ENST00000522670ENSG00000270255ENST00000603110ENSG00000274368ENST00000584892ENSG00000278886ENST00000623639CIL_0003T2_0002ENSMUSG00000030465ENSMUST00000038959ENSMUST00000059374ENSMUST00000093468ENSMUST00000093469ENSMUST00000098696ENSMUST00000120071ENSMUST00000145595ENSMUST00000146480ENSMUST00000150169ENSMUSG00000056426ENSMUST00000070514ENSMUSG00000077545ENSMUST00000104357ENSMUSG00000086883ENSMUST00000130307
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T2_0001ENSG00000156006ENST00000286479ENST00000520116ENSG00000187229ENST00000524252ENSG00000201157ENST00000364287ENSG00000251963ENST00000516154ENSG00000253335ENST00000522670ENSG00000270255ENST00000603110ENSG00000274368ENST00000584892ENSG00000278886ENST00000623639CIL_0003T2_0002ENSMUSG00000030465ENSMUST00000038959ENSMUST00000093468ENSMUST00000093469ENSMUST00000098696ENSMUST00000120071ENSMUST00000150169ENSMUSG00000056426ENSMUST00000070514ENSMUSG00000077545ENSMUST00000104357ENSMUSG00000086883ENSMUST00000130307
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156006 ENST00000286479 0.040±0.00 N/A N/A N/A 0.015±0.00 0.712±0.56 0.029±0.00 2.714±2.60 15.271±0.00 N/A N/A 0.119±0.07 0.076±0.02 0.029±0.00
ENST00000520116 N/A 0.032±0.00 N/A 0.049±0.00 0.549±0.44 0.343±0.10 N/A 2.626±0.00 7.500±0.00 N/A N/A N/A 0.119±0.11 0.072±0.00
ENSG00000187229 ENST00000524252 0.025±0.00 0.045±0.00 0.240±0.00 0.065±0.04 0.047±0.00 N/A 0.089±0.00 0.265±0.00 0.128±0.00 N/A N/A 0.131±0.18 0.011±0.00 0.004±0.00
ENSG00000201157 ENST00000364287 N/A N/A N/A 0.265±0.00 N/A N/A N/A 0.254±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000251963 ENST00000516154 N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A 0.627±0.00 N/A 0.804±0.00 N/A N/A
ENSG00000253335 ENST00000522670 N/A 0.075±0.00 N/A N/A 0.050±0.00 N/A 0.047±0.00 N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSG00000270255 ENST00000603110 N/A 0.057±0.00 N/A 0.200±0.00 N/A 0.206±0.00 N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A
ENSG00000274368 ENST00000584892 1.013±0.00 1.076±0.00 N/A 0.291±0.00 1.716±0.00 N/A N/A 0.280±0.00 N/A N/A 1.791±0.00 19.354±0.00 N/A 1.286±0.68
ENSG00000278886 ENST00000623639 N/A 0.490±0.00 N/A 0.042±0.00 0.631±0.00 0.776±0.00 0.056±0.00 1.980±1.84 0.447±0.00 0.242±0.11 N/A 0.712±0.51 N/A 0.096±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030465 ENSMUST00000038959 N/A 0.556±0.00 N/A 0.920±0.05 0.625±0.00 0.295±0.00 N/A N/A N/A N/A N/A 0.638±0.29 N/A N/A
ENSMUST00000059374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000093468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.219±2.16
ENSMUST00000093469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.614±0.02
ENSMUST00000098696 N/A 0.552±0.00 0.448±0.00 N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A 0.720±0.32 N/A N/A
ENSMUST00000120071 0.711±0.25 3.099±1.19 2.401±0.19 8.061±6.07 1.333±1.07 2.011±0.55 2.722±0.21 0.794±0.37 1.191±0.54 2.716±1.29 0.544±0.27 2.082±0.67 0.576±0.04 1.886±1.08
ENSMUST00000145595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150169 N/A 2.530±0.14 N/A N/A N/A 1.879±0.39 N/A N/A 1.464±0.20 N/A N/A 1.767±0.20 0.669±0.00 N/A
ENSMUSG00000056426 ENSMUST00000070514 N/A N/A 0.043±0.00 0.012±0.00 N/A N/A N/A N/A 0.005±0.00 0.046±0.00 N/A N/A 0.015±0.01 0.143±0.07
ENSMUSG00000077545 ENSMUST00000104357 N/A N/A N/A N/A N/A N/A N/A N/A 3.697±0.00 N/A N/A 6.670±0.00 N/A N/A
ENSMUSG00000086883 ENSMUST00000130307 1.427±0.00 N/A N/A N/A 5.311±0.00 N/A N/A N/A N/A N/A 0.356±0.00 N/A N/A 0.935±0.01

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