C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003T8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003008-ENSDARG00000008697 CGP 7955 12:27168132-27356942
GeneTranscriptPositionBiotype
ENSDARG00000003008 (prkcea)
protein kinase C, epsilon a
ENSDART00000105608 (prkcea-001) 27168132-27297884 protein_coding
ENSDARG00000008697 (epas1a)
endothelial PAS domain protein 1a
ENSDART00000024415 (epas1a-201) 27303684-27356942 protein_coding
ENSDART00000149198 (epas1a-001) 27303466-27356670 protein_coding
CIL_0003T8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171132-ENSG00000116016 CGP 9606 2:45651345-46386703
GeneTranscriptPositionBiotype
ENSG00000116016 (EPAS1)
endothelial PAS domain protein 1
ENST00000263734 (EPAS1-001) 46297402-46386703 protein_coding
ENST00000449347 (EPAS1-007) 46296608-46361090 protein_coding
ENST00000460015 (EPAS1-002) 46293667-46346998 processed_transcript
ENST00000463191 (EPAS1-005) 46356115-46361051 retained_intron
ENST00000465318 (EPAS1-006) 46381177-46382504 retained_intron
ENST00000466465 (EPAS1-010) 46379700-46386696 retained_intron
ENST00000467888 (EPAS1-004) 46297764-46347537 processed_transcript
ENST00000468530 (EPAS1-009) 46381635-46384550 processed_transcript
ENST00000475822 (EPAS1-003) 46335690-46356293 processed_transcript
ENST00000483692 (EPAS1-008) 46375636-46378702 retained_intron
ENSG00000171132 (PRKCE)
protein kinase C, epsilon
ENST00000306156 (PRKCE-001) 45651774-46187990 protein_coding
ENST00000394874 (PRKCE-008) 46000902-46010964 protein_coding
ENST00000421201 (PRKCE-006) 45651345-45843034 protein_coding
ENST00000462720 (PRKCE-004) 45652360-45701491 processed_transcript
ENST00000467135 (PRKCE-002) 45676734-45845758 processed_transcript
ENST00000469753 (PRKCE-013) 46073437-46151201 processed_transcript
ENST00000472021 (PRKCE-012) 45677025-45686347 processed_transcript
ENST00000476675 (PRKCE-011) 45675619-45980356 processed_transcript
ENST00000480453 (PRKCE-010) 45652401-45984567 processed_transcript
ENST00000480633 (PRKCE-014) 46073796-46151164 processed_transcript
ENST00000485176 (PRKCE-003) 45697982-45770860 processed_transcript
ENST00000489067 (PRKCE-007) 45978095-45984681 processed_transcript
ENST00000494472 (PRKCE-016) 46151102-46160060 processed_transcript
ENST00000497602 (PRKCE-009) 45697972-45852026 processed_transcript
ENST00000498388 (PRKCE-015) 46151053-46164895 processed_transcript
ENSG00000228481 (U51244.2)
ENST00000423120 (U51244.2-001) 45674701-45675476 antisense
ENSG00000231336 (AC017006.3)
ENST00000450080 (AC017006.3-001) 46166789-46167978 antisense
ENSG00000232696 (AC017006.2)
ENST00000444077 (AC017006.2-001) 46078015-46078828 antisense
ENSG00000233335 (AC016696.1)
ENST00000446949 (AC016696.1-001) 46256860-46257177 processed_pseudogene
ENSG00000233829 (AC017078.1)
ENST00000416146 (AC017078.1-001) 46003942-46004309 processed_pseudogene
ENSG00000278764 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000622034 (Metazoa_SRP.1-491) 46266690-46266971 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T8_0001ENSDARG00000003008ENSDART00000105608ENSDARG00000008697ENSDART00000024415ENSDART00000149198CIL_0003T8_0002ENSG00000116016ENST00000263734ENST00000449347ENST00000460015ENST00000463191ENST00000465318ENST00000466465ENST00000467888ENST00000468530ENST00000475822ENST00000483692ENSG00000171132ENST00000306156ENST00000394874ENST00000421201ENST00000462720ENST00000467135ENST00000469753ENST00000472021ENST00000476675ENST00000480453ENST00000480633ENST00000485176ENST00000489067ENST00000494472ENST00000497602ENST00000498388ENSG00000228481ENST00000423120ENSG00000231336ENST00000450080ENSG00000232696ENST00000444077ENSG00000233335ENST00000446949ENSG00000233829ENST00000416146ENSG00000278764ENST00000622034
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003T8_0001ENSDARG00000003008ENSDART00000105608ENSDARG00000008697ENSDART00000024415ENSDART00000149198CIL_0003T8_0002ENSG00000116016ENST00000263734ENSG00000171132ENST00000306156ENST00000394874ENST00000421201ENST00000467135ENST00000480453ENSG00000228481ENST00000423120ENSG00000231336ENST00000450080ENSG00000232696ENST00000444077ENSG00000233335ENST00000446949ENSG00000233829ENST00000416146ENSG00000278764ENST00000622034
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003008 ENSDART00000105608 N/A N/A N/A 16.455±15.40 N/A N/A 1.969±0.97 0.527±0.23 0.058±0.00 N/A 1.914±0.00 N/A N/A N/A
ENSDARG00000008697 ENSDART00000024415 N/A N/A N/A 3.152±1.46 N/A N/A 2.656±0.75 3.740±0.92 4.708±0.00 N/A 8.106±0.00 N/A N/A N/A
ENSDART00000149198 N/A N/A N/A 1.534±0.31 N/A N/A 3.292±1.58 2.441±0.15 1.840±0.00 N/A 2.296±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116016 ENST00000263734 210.705±0.00 80.076±0.00 16.309±0.00 7.960±2.87 48.156±41.36 44.041±36.37 26.841±15.16 21.025±6.94 15.809±5.18 578.387±465.76 17.301±0.00 15.663±14.94 191.153±41.23 10.771±4.69
ENST00000449347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171132 ENST00000306156 1.728±0.00 1.000±0.00 1.390±0.00 13.264±3.49 1.236±0.31 2.132±0.89 0.446±0.15 1.286±0.00 2.200±0.51 7.467±2.29 0.377±0.13 1.133±0.47 1.788±0.04 1.005±0.00
ENST00000394874 N/A N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A N/A 1.580±0.00 N/A 7.238±0.00
ENST00000421201 N/A N/A N/A N/A N/A N/A N/A 1.410±0.00 N/A N/A N/A N/A N/A N/A
ENST00000462720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.772±0.61
ENST00000469753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480453 N/A N/A N/A N/A N/A N/A N/A N/A 8.570±0.00 N/A N/A N/A N/A N/A
ENST00000480633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228481 ENST00000423120 N/A N/A N/A N/A 0.111±0.00 3.037±0.00 N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000231336 ENST00000450080 0.229±0.00 0.369±0.00 N/A 0.279±0.00 0.326±0.00 0.179±0.00 0.466±0.00 0.508±0.00 0.055±0.00 0.304±0.00 N/A N/A N/A 0.422±0.03
ENSG00000232696 ENST00000444077 0.120±0.00 0.091±0.00 0.312±0.00 0.126±0.00 0.255±0.00 0.233±0.00 0.345±0.00 0.268±0.00 0.306±0.00 0.405±0.00 N/A 0.487±0.20 0.058±0.00 0.114±0.00
ENSG00000233335 ENST00000446949 N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233829 ENST00000416146 N/A N/A N/A 0.081±0.00 0.901±0.00 0.330±0.00 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENSG00000278764 ENST00000622034 0.182±0.00 0.884±0.00 N/A 0.764±0.00 0.523±0.00 0.540±0.00 0.473±0.23 0.779±0.00 N/A 0.486±0.00 N/A 0.643±0.00 N/A 0.468±0.00

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