C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003VJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074688-ENSDARG00000005236 CGP 7955 12:28605791-28663317
GeneTranscriptPositionBiotype
ENSDARG00000005236 (srcap)
Snf2-related CREBBP activator protein 		ENSDART00000003080 (srcap-201) 28635939-28661697 protein_coding
ENSDART00000153426 (srcap-001) 28632751-28663317 protein_coding
ENSDARG00000074688 (fbrs)
fibrosin 		ENSDART00000111679 (fbrs-201) 28607629-28632372 protein_coding
ENSDART00000153054 (fbrs-001) 28605791-28632367 protein_coding
ENSDART00000153198 (fbrs-002) 28626931-28630023 protein_coding
CIL_0003VJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156860-ENSG00000080603 CGP 9606 16:30658431-30745194
GeneTranscriptPositionBiotype
ENSG00000080603 (SRCAP)
Snf2-related CREBBP activator protein 		ENST00000262518 (SRCAP-001) 30699141-30741409 protein_coding
ENST00000380361 (SRCAP-002) 30704067-30745169 nonsense_mediated_decay
ENST00000395059 (SRCAP-201) 30707258-30739733 protein_coding
ENST00000411466 (SRCAP-004) 30698209-30704309 protein_coding
ENST00000474008 (SRCAP-006) 30733950-30736263 retained_intron
ENST00000483083 (SRCAP-003) 30709896-30726262 protein_coding
ENST00000615541 (SRCAP-202) 30740191-30745194 protein_coding
ENSG00000156860 (FBRS)
fibrosin 		ENST00000287468 (FBRS-201) 30664457-30670810 protein_coding
ENST00000356166 (FBRS-001) 30658431-30670814 protein_coding
ENST00000468966 (FBRS-005) 30661978-30662621 retained_intron
ENST00000482749 (FBRS-002) 30661322-30664516 processed_transcript
ENST00000484152 (FBRS-007) 30659926-30662697 retained_intron
ENST00000494101 (FBRS-004) 30667939-30670809 retained_intron
ENST00000498588 (FBRS-006) 30659918-30660581 retained_intron
ENST00000543786 (FBRS-003) 30659922-30670809 nonsense_mediated_decay
ENST00000570170 (FBRS-009) 30665975-30669254 retained_intron
ENSG00000206755 (SNORA30)
small nucleolar RNA, H/ACA box 30 		ENST00000384028 (SNORA30-201) 30710537-30710665 snoRNA
ENSG00000222287 (RNU6-1043P)
RNA, U6 small nuclear 1043, pseudogene 		ENST00000410355 (RNU6-1043P-201) 30701337-30701435 snRNA
CIL_0003VJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042423-ENSMUSG00000053877 CGP 10090 7:127485221-127567054
GeneTranscriptPositionBiotype
ENSMUSG00000042423 (Fbrs)
fibrosin 		ENSMUST00000048896 (Fbrs-201) 127485221-127491513 protein_coding
ENSMUSG00000065259 (Snora30)
small nucleolar RNA, H/ACA box 30 		ENSMUST00000083325 (Snora30-201) 127527874-127528003 snoRNA
ENSMUSG00000098267 (Mir7060)
microRNA 7060 		ENSMUST00000183486 (Mir7060-201) 127489251-127489387 miRNA
ENSMUSG00000101225 (RP23-4H17.1)
RIKEN cDNA 1700008J07 gene 		ENSMUST00000185351 (RP23-4H17.1-001) 127510438-127512869 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VJ_0001ENSDARG00000005236ENSDART00000003080ENSDART00000153426ENSDARG00000074688ENSDART00000111679ENSDART00000153054ENSDART00000153198CIL_0003VJ_0002ENSG00000080603ENST00000262518ENST00000380361ENST00000395059ENST00000411466ENST00000474008ENST00000483083ENST00000615541ENSG00000156860ENST00000287468ENST00000356166ENST00000468966ENST00000482749ENST00000484152ENST00000494101ENST00000498588ENST00000543786ENST00000570170ENSG00000206755ENST00000384028ENSG00000222287ENST00000410355CIL_0003VJ_0003ENSMUSG00000042423ENSMUST00000048896ENSMUSG00000065259ENSMUST00000083325ENSMUSG00000098267ENSMUST00000183486ENSMUSG00000101225ENSMUST00000185351
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VJ_0001ENSDARG00000005236ENSDART00000003080ENSDART00000153426ENSDARG00000074688ENSDART00000111679ENSDART00000153054CIL_0003VJ_0002ENSG00000080603ENST00000262518ENST00000380361ENST00000395059ENSG00000156860ENST00000287468ENST00000356166ENST00000468966ENST00000494101ENST00000543786ENSG00000206755ENST00000384028ENSG00000222287ENST00000410355CIL_0003VJ_0003ENSMUSG00000042423ENSMUST00000048896ENSMUSG00000065259ENSMUST00000083325ENSMUSG00000098267ENSMUST00000183486ENSMUSG00000101225ENSMUST00000185351
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005236 ENSDART00000003080 N/A N/A N/A 1.424±0.34 N/A N/A 0.722±0.00 N/A 0.207±0.00 N/A N/A N/A N/A N/A
ENSDART00000153426 N/A N/A N/A 3.095±1.12 N/A N/A 4.130±3.18 8.223±4.77 0.922±0.00 N/A 1.173±0.00 N/A N/A N/A
ENSDARG00000074688 ENSDART00000111679 N/A N/A N/A 6.478±0.74 N/A N/A 4.649±2.22 4.837±0.38 0.773±0.00 N/A 1.939±0.00 N/A N/A N/A
ENSDART00000153054 N/A N/A N/A 5.378±2.50 N/A N/A 2.041±0.00 N/A 1.632±0.00 N/A N/A N/A N/A N/A
ENSDART00000153198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080603 ENST00000262518 N/A N/A N/A N/A N/A N/A N/A N/A 1.165±0.00 N/A 1.253±0.00 1.899±0.00 N/A N/A
ENST00000380361 N/A 3.745±0.00 N/A N/A 1.753±0.00 3.016±0.00 N/A 3.756±0.00 1.145±0.00 2.397±1.19 N/A 7.905±2.16 6.103±0.00 5.810±0.00
ENST00000395059 12.789±0.00 9.677±0.00 3.513±0.00 6.618±4.66 5.374±1.49 4.520±0.83 4.766±3.41 2.936±1.60 2.134±0.09 4.607±1.05 5.592±0.00 7.912±5.87 5.584±1.21 15.250±2.16
ENST00000411466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156860 ENST00000287468 6.791±0.00 17.551±0.00 N/A 5.858±0.00 6.546±0.00 5.797±0.00 3.630±0.00 7.772±0.00 3.883±0.00 13.002±0.00 9.966±0.00 15.586±6.02 11.146±5.99 21.927±2.88
ENST00000356166 9.020±0.00 9.033±0.00 N/A 3.720±3.26 3.857±3.11 3.798±2.56 5.665±0.00 2.679±2.13 2.300±0.00 3.465±2.70 7.634±6.97 9.362±7.76 6.856±1.43 35.562±3.07
ENST00000468966 N/A N/A N/A N/A N/A N/A N/A 1.565±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.036±0.00 N/A N/A N/A
ENST00000498588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543786 6.149±0.00 9.932±0.00 N/A 6.583±0.00 5.206±0.00 9.182±0.00 N/A 6.088±0.00 0.974±0.00 9.279±0.00 N/A N/A 3.179±0.18 25.241±2.14
ENST00000570170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206755 ENST00000384028 N/A 0.660±0.00 110.955±0.00 37.146±0.00 42.759±0.00 204.832±0.00 22.964±0.00 N/A 40.797±0.00 102.843±0.00 N/A 150.309±0.00 N/A N/A
ENSG00000222287 ENST00000410355 N/A 0.681±0.00 N/A N/A N/A N/A N/A 0.885±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042423 ENSMUST00000048896 4.783±1.96 9.973±1.50 6.354±1.69 5.440±3.37 9.916±4.73 5.389±1.51 2.512±0.56 3.534±0.99 2.488±1.35 8.377±2.38 4.459±2.44 6.372±2.99 15.764±13.89 8.515±2.87
ENSMUSG00000065259 ENSMUST00000083325 N/A N/A 62.375±0.00 11.515±6.82 N/A N/A N/A N/A 5.479±0.96 N/A 2.416±0.00 1364.685±1317.98 38.170±43.55 9.869±0.00
ENSMUSG00000098267 ENSMUST00000183486 N/A N/A 13.073±0.00 N/A N/A 4833.340±0.00 981.455±0.00 753.978±130.99 50.505±66.08 720.163±209.01 N/A 899.677±894.65 3.268±0.00 N/A
ENSMUSG00000101225 ENSMUST00000185351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.359±6.93

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