C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Snf2-related CREBBP activator protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000080603 SRCAP 9606 + 16:30698209-30745194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262518 SRCAP-001 30699141-30741409 protein_coding
  ENST00000380361 SRCAP-002 30704067-30745169 nonsense_mediated_decay
  ENST00000395059 SRCAP-201 30707258-30739733 protein_coding
  ENST00000411466 SRCAP-004 30698209-30704309 protein_coding
  ENST00000474008 SRCAP-006 30733950-30736263 retained_intron
  ENST00000483083 SRCAP-003 30709896-30726262 protein_coding
  ENST00000615541 SRCAP-202 30740191-30745194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262518ENST00000380361ENST00000395059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262518 N/A N/A N/A N/A N/A N/A N/A N/A 1.165±0.00 N/A 1.253±0.00 1.899±0.00 N/A N/A
ENST00000380361 N/A 3.745±0.00 N/A N/A 1.753±0.00 3.016±0.00 N/A 3.756±0.00 1.145±0.00 2.397±1.19 N/A 7.905±2.16 6.103±0.00 5.810±0.00
ENST00000395059 12.789±0.00 9.677±0.00 3.513±0.00 6.618±4.66 5.374±1.49 4.520±0.83 4.766±3.41 2.936±1.60 2.134±0.09 4.607±1.05 5.592±0.00 7.912±5.87 5.584±1.21 15.250±2.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0002 CGP 16:30658431-30745194
CIL_0001KJ CIL_0001KJ_0001 CGP 16:30698209-30761176

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003713 TAS transcription coactivator activity
GO:0004386 IEA helicase activity
GO:0004402 TAS histone acetyltransferase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0009607 IEA response to biotic stimulus
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0016573 TAS histone acetylation
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005236 srcap Snf2-related CREBBP activator protein protein_coding Danio_rerio
ENSMUSG00000053877 Srcap Snf2-related CREBBP activator protein protein_coding Mus_musculus

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