C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Snf2-related CREBBP activator protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395059 SRCAP-201 ENSG00000080603 9606 + 16:30707258-30739733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395059 12.789±0.00 9.677±0.00 3.513±0.00 6.618±4.66 5.374±1.49 4.520±0.83 4.766±3.41 2.936±1.60 2.134±0.09 4.607±1.05 5.592±0.00 7.912±5.87 5.584±1.21 15.250±2.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VJ CIL_0003VJ_0002 CGP 16:30658431-30745194
CIL_0001KJ CIL_0001KJ_0001 CGP 16:30698209-30761176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190390 Srcap-013 protein_coding Mus_musculus 0 6433
ENSMUST00000189629 Srcap-009 nonsense_mediated_decay Mus_musculus 0 4172
ENSMUST00000186954 Srcap-014 protein_coding Mus_musculus 0 4172
ENSMUST00000187040 Srcap-001 protein_coding Mus_musculus 0 3932
ENSMUST00000186672 Srcap-005 protein_coding Mus_musculus 0 2263
ENSMUST00000066582 Srcap-201 protein_coding Mus_musculus 0 1522
ENSMUST00000187164 Srcap-006 retained_intron Mus_musculus 0 1522
ENSMUST00000084563 Srcap-202 protein_coding Mus_musculus 0 1288
ENSMUST00000188124 Srcap-003 protein_coding Mus_musculus 0 1096
ENSMUST00000185401 Srcap-002 retained_intron Mus_musculus 0 885
ENSMUST00000098025 Srcap-203 protein_coding Mus_musculus 0 366
ENSMUST00000189136 Srcap-004 protein_coding Mus_musculus 0 333
ENSMUST00000189812 Srcap-007 retained_intron Mus_musculus 0 196

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