C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003WO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016649-ENSDARG00000007130 CGP 7955 11:42944035-42959301
GeneTranscriptPositionBiotype
ENSDARG00000007130 (mrto4)
mRNA turnover 4 homolog (S. cerevisiae) 		ENSDART00000002556 (mrto4-201) 42951291-42959301 protein_coding
ENSDARG00000016649 (akr7a3)
aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) 		ENSDART00000014871 (akr7a3-201) 42944035-42951294 protein_coding
CIL_0003WO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028743-ENSMUSG00000028741 CGP 10090 4:139310744-139352576
GeneTranscriptPositionBiotype
ENSMUSG00000028741 (Mrto4)
MRT4, mRNA turnover 4, homolog (S. cerevisiae) 		ENSMUST00000030513 (Mrto4-002) 139347445-139352298 protein_coding
ENSMUST00000102503 (Mrto4-001) 139347435-139352576 protein_coding
ENSMUST00000123968 (Mrto4-003) 139349875-139352310 retained_intron
ENSMUST00000128239 (Mrto4-007) 139348162-139349621 retained_intron
ENSMUST00000131052 (Mrto4-005) 139347435-139349603 processed_transcript
ENSMUST00000139749 (Mrto4-006) 139348760-139352533 retained_intron
ENSMUST00000155257 (Mrto4-004) 139348698-139352311 protein_coding
ENSMUSG00000028743 (Akr7a5)
aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) 		ENSMUST00000073787 (Akr7a5-001) 139310744-139318426 protein_coding
ENSMUST00000153645 (Akr7a5-002) 139316582-139317410 processed_transcript
ENSMUSG00000080708 (Ccnd3-ps)
cyclin D3, pseudogene 		ENSMUST00000117963 (Ccnd3-ps-001) 139345300-139346180 processed_pseudogene
ENSMUSG00000083404 (Gm13019)
predicted gene 13019 		ENSMUST00000120000 (Gm13019-001) 139342183-139343333 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WO_0001ENSDARG00000007130ENSDART00000002556ENSDARG00000016649ENSDART00000014871CIL_0003WO_0002ENSMUSG00000028741ENSMUST00000030513ENSMUST00000102503ENSMUST00000123968ENSMUST00000128239ENSMUST00000131052ENSMUST00000139749ENSMUST00000155257ENSMUSG00000028743ENSMUST00000073787ENSMUST00000153645ENSMUSG00000080708ENSMUST00000117963ENSMUSG00000083404ENSMUST00000120000
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WO_0001ENSDARG00000007130ENSDART00000002556ENSDARG00000016649ENSDART00000014871CIL_0003WO_0002ENSMUSG00000028741ENSMUST00000030513ENSMUST00000102503ENSMUST00000128239ENSMUST00000131052ENSMUSG00000028743ENSMUST00000073787ENSMUST00000153645ENSMUSG00000080708ENSMUST00000117963ENSMUSG00000083404ENSMUST00000120000
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007130 ENSDART00000002556 N/A N/A N/A 7.613±2.13 N/A N/A 7.739±2.92 12.886±3.75 7.634±0.00 N/A 7.617±0.00 N/A N/A N/A
ENSDARG00000016649 ENSDART00000014871 N/A N/A N/A 6.336±2.65 N/A N/A 15.810±4.61 17.242±2.08 2.155±0.00 N/A 11.269±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028741 ENSMUST00000030513 N/A N/A N/A 16.603±0.00 1.624±0.00 N/A N/A N/A N/A N/A N/A 20.454±3.41 25.260±18.99 14.021±0.00
ENSMUST00000102503 6.584±1.66 7.850±2.17 15.608±1.53 12.410±1.51 4.837±1.36 4.399±1.03 4.692±0.30 5.351±0.84 16.641±14.98 4.125±0.79 14.702±0.96 8.568±5.43 19.539±13.97 18.507±5.16
ENSMUST00000123968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128239 N/A N/A N/A N/A 1.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131052 5.924±3.34 5.565±2.03 N/A 7.699±1.94 3.114±0.71 2.269±1.34 3.791±0.27 4.694±1.11 8.597±4.33 5.626±0.43 N/A 12.723±5.05 7.679±4.86 26.168±2.20
ENSMUST00000139749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028743 ENSMUST00000073787 14.042±3.05 37.371±16.24 5.880±1.11 12.207±7.37 13.139±4.89 26.943±2.45 12.384±1.94 106.118±8.28 32.255±21.53 10.157±2.16 19.590±1.48 26.435±11.02 20.190±2.67 8.492±1.09
ENSMUST00000153645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.777±0.00 N/A N/A
ENSMUSG00000080708 ENSMUST00000117963 0.085±0.07 0.061±0.00 0.036±0.00 0.108±0.02 0.052±0.01 0.054±0.00 N/A N/A 0.034±0.01 0.113±0.00 0.168±0.00 0.112±0.00 1.471±2.14 0.076±0.04
ENSMUSG00000083404 ENSMUST00000120000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.506±0.00

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