C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003XF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000000370-ENSDARG00000087373 CGP 7955 16:10070124-10595060
GeneTranscriptPositionBiotype
ENSDARG00000000370 (triob)
trio Rho guanine nucleotide exchange factor b
ENSDART00000000382 (triob-201) 10070124-10251870 protein_coding
ENSDART00000153785 (triob-001) 10162188-10325662 protein_coding
ENSDARG00000084427 (5S_rRNA)
5S ribosomal RNA
ENSDART00000119827 (5S_rRNA.665-201) 10564521-10564635 rRNA
ENSDARG00000087373 (dnah5)
dynein, axonemal, heavy chain 5
ENSDART00000123150 (dnah5-201) 10479471-10594885 protein_coding
ENSDART00000149818 (dnah5-001) 10513670-10595060 protein_coding
ENSDART00000150026 (dnah5-002) 10561109-10570787 protein_coding
CIL_0003XF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022263-ENSMUSG00000022262 CGP 10090 15:27730652-28472045
GeneTranscriptPositionBiotype
ENSMUSG00000022262 (Dnah5)
dynein, axonemal, heavy chain 5
ENSMUST00000067048 (Dnah5-001) 28203752-28472045 protein_coding
ENSMUSG00000022263 (Trio)
triple functional domain (PTPRF interacting)
ENSMUST00000090247 (Trio-201) 27730652-28025848 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XF_0001ENSDARG00000000370ENSDART00000000382ENSDART00000153785ENSDARG00000084427ENSDART00000119827ENSDARG00000087373ENSDART00000123150ENSDART00000149818ENSDART00000150026CIL_0003XF_0002ENSMUSG00000022262ENSMUST00000067048ENSMUSG00000022263ENSMUST00000090247
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XF_0001ENSDARG00000000370ENSDART00000000382ENSDARG00000084427ENSDART00000119827ENSDARG00000087373ENSDART00000123150ENSDART00000149818ENSDART00000150026CIL_0003XF_0002ENSMUSG00000022262ENSMUST00000067048ENSMUSG00000022263ENSMUST00000090247
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000000370 ENSDART00000000382 N/A N/A N/A N/A N/A N/A 0.469±0.06 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000084427 ENSDART00000119827 N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087373 ENSDART00000123150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A
ENSDART00000149818 N/A N/A N/A 0.234±0.13 N/A N/A 0.036±0.03 0.579±0.00 N/A N/A 0.063±0.00 N/A N/A N/A
ENSDART00000150026 N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022262 ENSMUST00000067048 0.041±0.03 0.011±0.01 0.004±0.00 0.155±0.18 N/A 0.190±0.06 0.070±0.05 0.027±0.01 0.007±0.01 1.185±0.43 0.001±0.00 2.554±1.17 0.007±0.00 0.144±0.06
ENSMUSG00000022263 ENSMUST00000090247 7.807±2.66 5.777±1.14 3.609±2.70 20.353±1.92 5.847±2.21 6.774±1.85 4.042±0.53 6.081±1.94 1.110±0.44 5.139±1.98 3.012±0.64 7.092±3.18 5.663±2.07 1.413±0.62

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