C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trio Rho guanine nucleotide exchange factor b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000153785 triob-001 ENSDARG00000000370 7955 - 16:10162188-10325662 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XF CIL_0003XF_0001 CGP 16:10070124-10595060

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076810 Kalrn-011 protein_coding Mus_musculus 0 206
ENSMUST00000089655 Kalrn-004 protein_coding Mus_musculus 0 206
ENSMUST00000090247 Trio-201 protein_coding Mus_musculus 0 1953
ENSMUST00000114960 Kalrn-001 protein_coding Mus_musculus 0 206
ENSMUST00000114961 Kalrn-012 protein_coding Mus_musculus 0 206
ENSMUST00000142817 Kalrn-009 protein_coding Mus_musculus 0 206
ENSMUST00000151491 Kalrn-002 protein_coding Mus_musculus 0 206
ENSMUST00000156668 Kalrn-017 processed_transcript Mus_musculus 3.9937e-43 178
ENST00000240874 KALRN-005 protein_coding Homo_sapiens 0 459
ENST00000354186 KALRN-004 protein_coding Homo_sapiens 0 562
ENST00000360013 KALRN-201 protein_coding Homo_sapiens 0 459
ENST00000393501 KALRN-008 retained_intron Homo_sapiens 0 684
ENST00000460856 KALRN-013 protein_coding Homo_sapiens 0 562

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