C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: plexin C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135735 plxnc1-001 ENSDARG00000015278 7955 - 4:17351306-17384096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000135735
Transcript ID Brain Heart Kidney
ENSDART00000135735 1.712±0.00 0.455±0.02 3.008±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XW CIL_0003XW_0001 CGP 4:17351306-17484750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324093 PLXND1-001 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000506979 PLXND1-014 protein_coding Homo_sapiens 9.00054e-42 174
ENST00000508630 PLXND1-016 retained_intron Homo_sapiens 7e-27 124
ENST00000512744 PLXND1-005 nonsense_mediated_decay Homo_sapiens 4e-31 141
ENST00000512807 PLXND1-017 retained_intron Homo_sapiens 0.00000000001 75

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