C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Y2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135972-ENSG00000135973 CGP 9606 2:105037983-105243049
GeneTranscriptPositionBiotype
ENSG00000135972 (MRPS9)
mitochondrial ribosomal protein S9 		ENST00000258455 (MRPS9-001) 105037983-105099960 protein_coding
ENST00000413583 (MRPS9-002) 105089018-105097288 nonsense_mediated_decay
ENST00000472220 (MRPS9-003) 105092098-105099900 retained_intron
ENSG00000135973 (GPR45)
G protein-coupled receptor 45 		ENST00000258456 (GPR45-001) 105241743-105243049 protein_coding
ENSG00000224509 (AC010884.1)
 ENST00000456519 (AC010884.1-001) 104936411-105038496 antisense
ENSG00000226508 (AC104655.3)
 ENST00000436841 (AC104655.3-001) 105144113-105145222 lincRNA
ENST00000438148 (AC104655.3-003) 105144142-105145424 lincRNA
ENST00000452037 (AC104655.3-002) 105144123-105144912 lincRNA
ENSG00000231851 (AC104655.2)
 ENST00000432211 (AC104655.2-001) 105097052-105098637 antisense
ENST00000449177 (AC104655.2-002) 105097060-105102944 antisense
CIL_0003Y2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060679-ENSMUSG00000041907 CGP 10090 1:42851233-43035456
GeneTranscriptPositionBiotype
ENSMUSG00000041907 (Gpr45)
G protein-coupled receptor 45 		ENSMUST00000114761 (Gpr45-201) 43032060-43033605 protein_coding
ENSMUST00000179655 (Gpr45-002) 42953139-43030781 processed_transcript
ENSMUST00000179766 (Gpr45-001) 42952963-43035456 protein_coding
ENSMUST00000187998 (Gpr45-004) 42953182-42953878 processed_transcript
ENSMUST00000188621 (Gpr45-003) 42952872-42955155 processed_transcript
ENSMUSG00000060679 (Mrps9)
mitochondrial ribosomal protein S9 		ENSMUST00000057208 (Mrps9-002) 42851233-42905682 protein_coding
ENSMUST00000185376 (Mrps9-003) 42851276-42899679 processed_transcript
ENSMUST00000185523 (Mrps9-001) 42851276-42902013 processed_transcript
ENSMUST00000187414 (Mrps9-008) 42862514-42899128 retained_intron
ENSMUST00000188174 (Mrps9-005) 42851285-42881931 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y2_0001ENSG00000135972ENST00000258455ENST00000413583ENST00000472220ENSG00000135973ENST00000258456ENSG00000224509ENST00000456519ENSG00000226508ENST00000436841ENST00000438148ENST00000452037ENSG00000231851ENST00000432211ENST00000449177CIL_0003Y2_0002ENSMUSG00000041907ENSMUST00000114761ENSMUST00000179655ENSMUST00000179766ENSMUST00000187998ENSMUST00000188621ENSMUSG00000060679ENSMUST00000057208ENSMUST00000185376ENSMUST00000185523ENSMUST00000187414ENSMUST00000188174
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y2_0001ENSG00000135972ENST00000258455ENST00000472220ENSG00000135973ENST00000258456ENSG00000224509ENST00000456519ENSG00000226508ENST00000436841ENST00000438148ENST00000452037ENSG00000231851ENST00000432211CIL_0003Y2_0002ENSMUSG00000041907ENSMUST00000114761ENSMUST00000179655ENSMUST00000179766ENSMUST00000187998ENSMUST00000188621ENSMUSG00000060679ENSMUST00000057208ENSMUST00000185523ENSMUST00000188174
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135972 ENST00000258455 5.568±0.00 10.005±0.00 3.384±0.00 7.539±1.12 4.819±3.19 6.377±4.23 13.592±6.87 9.394±4.86 5.608±1.52 3.658±0.72 13.215±8.60 16.973±11.53 8.492±3.27 21.515±5.97
ENST00000413583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472220 N/A N/A N/A N/A N/A 2.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135973 ENST00000258456 N/A 0.169±0.00 N/A 0.486±0.28 0.027±0.00 0.098±0.00 0.091±0.00 0.213±0.00 N/A N/A N/A 0.210±0.17 0.161±0.00 0.259±0.12
ENSG00000224509 ENST00000456519 N/A 0.060±0.00 0.468±0.00 0.544±0.12 0.138±0.04 0.168±0.00 N/A 0.180±0.00 N/A N/A N/A 0.126±0.05 0.100±0.00 0.265±0.11
ENSG00000226508 ENST00000436841 N/A N/A N/A 0.427±0.00 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.155±0.00 0.126±0.00 0.111±0.00
ENST00000438148 0.108±0.00 0.057±0.00 N/A 0.066±0.00 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00
ENST00000452037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.200±0.14 0.449±0.45 N/A
ENSG00000231851 ENST00000432211 3.676±0.00 7.003±0.00 N/A 8.029±0.00 5.724±0.00 5.598±0.00 N/A 9.516±0.00 5.235±0.87 2.169±0.00 10.905±0.00 N/A 4.282±0.00 11.855±0.00
ENST00000449177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041907 ENSMUST00000114761 N/A 0.073±0.00 N/A 2.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.04
ENSMUST00000179655 N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A 0.027±0.00
ENSMUST00000179766 N/A N/A N/A 1.951±0.99 N/A N/A N/A N/A 0.011±0.01 N/A N/A N/A 0.057±0.00 N/A
ENSMUST00000187998 N/A 0.275±0.18 N/A N/A 0.110±0.07 0.143±0.07 0.118±0.00 0.115±0.03 0.072±0.00 0.085±0.06 N/A 0.418±0.30 0.072±0.00 0.142±0.11
ENSMUST00000188621 0.188±0.14 0.567±0.24 0.152±0.00 2.268±0.25 0.139±0.08 0.195±0.05 0.059±0.01 0.060±0.04 0.055±0.04 0.074±0.03 0.016±0.00 0.184±0.11 0.100±0.12 0.038±0.01
ENSMUSG00000060679 ENSMUST00000057208 11.727±1.73 18.154±0.76 15.200±0.82 17.132±5.54 9.751±2.67 13.613±1.43 25.933±4.46 19.492±2.06 14.709±6.12 11.075±1.93 14.818±1.12 14.620±5.78 21.705±6.49 13.714±1.13
ENSMUST00000185376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185523 N/A N/A N/A 2.348±0.00 N/A N/A N/A N/A N/A 1.467±0.00 N/A 3.593±0.54 1.491±0.00 N/A
ENSMUST00000187414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.944±0.00 N/A N/A

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