C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003YP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061419-ENSDARG00000057678 CGP 7955 10:20304764-20390946
GeneTranscriptPositionBiotype
ENSDARG00000057678 (sfrp1b)
secreted frizzled-related protein 1b 		ENSDART00000080143 (sfrp1b-001) 20385346-20390946 protein_coding
ENSDARG00000061419 (zmat4b)
zinc finger, matrin type 4b 		ENSDART00000098600 (zmat4b-201) 20310725-20366262 protein_coding
ENSDART00000144378 (zmat4b-001) 20304764-20373046 protein_coding
CIL_0003YP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165061-ENSG00000104332 CGP 9606 8:40530590-41309497
GeneTranscriptPositionBiotype
ENSG00000104332 (SFRP1)
secreted frizzled-related protein 1 		ENST00000220772 (SFRP1-001) 41261958-41309497 protein_coding
ENST00000379845 (SFRP1-003) 41261964-41306990 protein_coding
ENSG00000165061 (ZMAT4)
zinc finger, matrin-type 4 		ENST00000297737 (ZMAT4-002) 40530594-40897825 protein_coding
ENST00000315769 (ZMAT4-001) 40530590-40897833 protein_coding
ENST00000518242 (ZMAT4-008) 40696996-40786782 retained_intron
ENST00000519406 (ZMAT4-003) 40581204-40888545 protein_coding
ENST00000519806 (ZMAT4-009) 40674364-40697337 retained_intron
ENST00000522623 (ZMAT4-006) 40767646-40897807 nonsense_mediated_decay
ENST00000523188 (ZMAT4-007) 40697270-40897824 nonsense_mediated_decay
ENST00000523542 (ZMAT4-005) 40697274-40897810 nonsense_mediated_decay
ENST00000523823 (ZMAT4-004) 40808523-40884944 processed_transcript
ENSG00000253509 (CTD-3080F16.3)
 ENST00000517495 (CTD-3080F16.3-001) 41275115-41277003 sense_intronic
ENSG00000254383 (RP11-465K16.1)
 ENST00000518428 (RP11-465K16.1-001) 40900016-40901854 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YP_0001ENSDARG00000057678ENSDART00000080143ENSDARG00000061419ENSDART00000098600ENSDART00000144378CIL_0003YP_0002ENSG00000104332ENST00000220772ENST00000379845ENSG00000165061ENST00000297737ENST00000315769ENST00000518242ENST00000519406ENST00000519806ENST00000522623ENST00000523188ENST00000523542ENST00000523823ENSG00000253509ENST00000517495ENSG00000254383ENST00000518428
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YP_0001ENSDARG00000057678ENSDART00000080143ENSDARG00000061419ENSDART00000098600ENSDART00000144378CIL_0003YP_0002ENSG00000104332ENST00000220772ENST00000379845ENSG00000165061ENST00000297737ENST00000315769ENST00000519406ENST00000519806ENSG00000253509ENST00000517495ENSG00000254383ENST00000518428
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057678 ENSDART00000080143 N/A N/A N/A 8.234±3.27 N/A N/A 6.070±3.58 17.971±9.10 N/A N/A 13.173±0.00 N/A N/A N/A
ENSDARG00000061419 ENSDART00000098600 N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144378 N/A N/A N/A 0.794±0.28 N/A N/A 0.123±0.00 0.810±0.00 N/A N/A 0.168±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104332 ENST00000220772 12.384±0.00 7.437±0.00 10.047±0.00 5.104±4.36 48.061±41.28 14.309±13.15 8.256±3.26 69.260±0.00 4.838±3.96 2.448±1.22 0.867±0.71 20.933±20.60 18.393±8.87 33.083±20.07
ENST00000379845 N/A N/A 2.556±0.00 1.264±0.00 N/A 2.486±0.00 N/A 0.426±0.00 N/A 0.879±0.00 N/A 0.078±0.00 N/A N/A
ENSG00000165061 ENST00000297737 N/A N/A N/A 5.281±2.92 N/A N/A 0.342±0.00 N/A N/A N/A N/A 0.309±0.00 0.063±0.00 0.603±0.00
ENST00000315769 0.039±0.00 0.045±0.00 0.121±0.00 N/A 0.033±0.00 N/A 0.056±0.00 0.050±0.00 0.005±0.00 0.061±0.00 N/A N/A 0.202±0.00 N/A
ENST00000518242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519406 N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519806 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A
ENST00000522623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253509 ENST00000517495 N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000254383 ENST00000518428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A 0.045±0.02

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