C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secernin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000242059 SCRN1-001 ENSG00000136193 9606 - 7:29920103-29989798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000242059
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000242059 5.477±0.00 5.052±0.00 36.866±10.21 2.680±0.13 6.242±5.47 1.903±0.88 4.518±4.41 4.711±4.09 4.054±1.06 1.203±0.00 7.602±5.83 2.365±0.30 5.772±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZO CIL_0003ZO_0001 CGP 7:29806486-29990289
CIL_0003ZB CIL_0003ZB_0001 CGP 7:29920103-30026684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006887 ISS exocytosis
GO:0016805 IEA dipeptidase activity
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019268 Scrn1-001 protein_coding Mus_musculus 0 1445
ENSMUST00000124325 Scrn1-002 retained_intron Mus_musculus 0 481
ENSMUST00000129744 Scrn1-003 protein_coding Mus_musculus 0 246

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