C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: iron-sulfur cluster assembly 2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021667 Isca2-201 ENSMUSG00000021241 10090 + 12:84773270-84775089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021667 19.793±13.71 19.756±1.72 23.977±3.75 16.222±10.03 17.821±9.40 6.396±0.91 26.221±2.34 17.095±4.27 24.743±11.38 7.493±0.81 13.462±1.51 8.774±4.55 12.247±6.71 33.092±14.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T3 CIL_0002T3_0003 CGP 12:84754560-84775089
CIL_000407 CIL_000407_0002 CGP 12:84773270-84876532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016226 IEA iron-sulfur cluster assembly
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298818 ISCA2-002 protein_coding Homo_sapiens 0 632
ENST00000425548 ISCA2P1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000554924 ISCA2-003 protein_coding Homo_sapiens 0 331
ENST00000555139 ISCA2-004 retained_intron Homo_sapiens 0 268
ENST00000556816 ISCA2-001 protein_coding Homo_sapiens 0 684

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