C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000408_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106100-ENSG00000006625 CGP 9606 7:30424527-30551479
GeneTranscriptPositionBiotype
ENSG00000106100 (NOD1)
nucleotide-binding oligomerization domain containing 1 		ENST00000222823 (NOD1-001) 30424527-30478780 protein_coding
ENST00000411552 (NOD1-004) 30456743-30478728 protein_coding
ENST00000413433 (NOD1-006) 30456743-30478636 protein_coding
ENST00000419601 (NOD1-007) 30456785-30478784 protein_coding
ENST00000419799 (NOD1-005) 30456743-30478742 protein_coding
ENST00000434755 (NOD1-002) 30424530-30478738 nonsense_mediated_decay
ENST00000467706 (NOD1-008) 30425209-30433414 retained_intron
ENST00000489614 (NOD1-003) 30424534-30447977 retained_intron
ENSG00000196295 (AC005154.6)
 ENST00000355837 (AC005154.6-001) 30548357-30564617 retained_intron
ENST00000426529 (AC005154.6-003) 30548359-30594743 retained_intron
ENST00000434399 (AC005154.6-002) 30516309-30562825 antisense
ENST00000440438 (AC005154.6-025) 30547166-30550781 lincRNA
ENST00000454922 (AC005154.6-026) 30577512-30585972 antisense
ENST00000577889 (AC005154.6-019) 30550568-30561519 retained_intron
ENST00000578245 (AC005154.6-009) 30550321-30577759 retained_intron
ENST00000578293 (AC005154.6-017) 30516975-30561516 antisense
ENST00000578572 (AC005154.6-023) 30550459-30561703 antisense
ENST00000578994 (AC005154.6-006) 30577904-30594809 antisense
ENST00000579024 (AC005154.6-022) 30568488-30573013 antisense
ENST00000579174 (AC005154.6-007) 30574704-30594808 antisense
ENST00000580440 (AC005154.6-004) 30577585-30594760 antisense
ENST00000580902 (AC005154.6-018) 30523975-30563998 antisense
ENST00000581665 (AC005154.6-014) 30568833-30594760 antisense
ENST00000581794 (AC005154.6-011) 30566404-30594769 retained_intron
ENST00000582145 (AC005154.6-016) 30561562-30573100 antisense
ENST00000582549 (AC005154.6-012) 30578070-30594758 antisense
ENST00000582733 (AC005154.6-005) 30568802-30594795 retained_intron
ENST00000582838 (AC005154.6-020) 30550318-30552220 retained_intron
ENST00000583664 (AC005154.6-021) 30578068-30594760 antisense
ENST00000584023 (AC005154.6-008) 30574423-30576742 retained_intron
ENST00000584108 (AC005154.6-015) 30564144-30573782 antisense
ENST00000584199 (AC005154.6-010) 30562077-30594769 antisense
ENST00000584372 (AC005154.6-013) 30568677-30594763 antisense
ENST00000584621 (AC005154.6-024) 30558096-30573088 antisense
ENST00000614950 (AC005154.6-028) 30564144-30573148 antisense
ENST00000621272 (AC005154.6-027) 30564147-30568994 antisense
ENSG00000226874 (AC005154.8)
 ENST00000438110 (AC005154.8-001) 30544053-30544431 processed_pseudogene
ENSG00000264520 (RP4-777O23.2)
 ENST00000583191 (RP4-777O23.2-001) 30525731-30533613 lincRNA
ENSG00000272638 (GS1-114I9.1)
 ENST00000608195 (GS1-114I9.1-001) 30424672-30425412 antisense
CIL_000408_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038058-ENSMUSG00000002797 CGP 10090 6:54923942-54992950
GeneTranscriptPositionBiotype
ENSMUSG00000002797 (Ggct)
gamma-glutamyl cyclotransferase 		ENSMUST00000002874 (Ggct-003) 54985648-54992707 processed_transcript
ENSMUST00000131475 (Ggct-001) 54982580-54992950 protein_coding
ENSMUST00000136527 (Ggct-002) 54986481-54992863 retained_intron
ENSMUSG00000038058 (Nod1)
nucleotide-binding oligomerization domain containing 1 		ENSMUST00000060655 (Nod1-201) 54923942-54972612 protein_coding
ENSMUST00000168172 (Nod1-202) 54923942-54971661 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000408_0001ENSG00000106100ENST00000222823ENST00000419601ENST00000419799ENST00000434755ENST00000467706ENST00000489614ENSG00000196295ENST00000355837ENST00000584108ENSG00000226874ENST00000438110ENSG00000264520ENST00000583191ENSG00000272638ENST00000608195CIL_000408_0002ENSMUSG00000002797ENSMUST00000002874ENSMUST00000131475ENSMUSG00000038058ENSMUST00000060655ENSMUST00000168172
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106100 ENST00000222823 5.766±0.00 2.402±0.00 0.353±0.00 0.298±0.17 1.175±0.57 1.168±0.74 N/A 1.187±0.00 0.463±0.10 2.710±0.96 0.373±0.00 1.674±1.52 2.008±0.73 0.851±0.51
ENST00000411552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419601 N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A 1.660±0.00 N/A N/A 3.211±0.00 N/A N/A
ENST00000419799 N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434755 N/A N/A N/A N/A N/A 1.316±0.00 N/A N/A N/A 0.932±0.00 N/A N/A N/A N/A
ENST00000467706 N/A N/A N/A N/A 2.003±0.00 1.525±0.00 1.409±0.00 N/A N/A N/A 2.101±0.00 N/A N/A 0.751±0.00
ENST00000489614 N/A N/A N/A 0.212±0.00 0.611±0.00 N/A 0.343±0.00 N/A N/A 1.339±0.00 N/A N/A N/A N/A
ENSG00000196295 ENST00000355837 N/A N/A N/A N/A 2.196±0.00 N/A N/A 0.613±0.00 N/A 1.738±0.00 N/A 1.129±0.00 N/A N/A
ENST00000426529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.791±0.00 N/A N/A N/A
ENST00000584199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226874 ENST00000438110 N/A 0.250±0.00 N/A 0.185±0.00 0.035±0.00 0.998±0.93 0.129±0.00 N/A 1.212±0.00 4.095±0.00 N/A 0.318±0.23 0.141±0.00 N/A
ENSG00000264520 ENST00000583191 0.175±0.00 0.328±0.00 N/A 0.250±0.00 0.147±0.00 0.178±0.00 N/A N/A N/A 0.350±0.00 N/A 0.258±0.00 N/A 0.192±0.07
ENSG00000272638 ENST00000608195 N/A N/A 0.753±0.00 N/A 2.203±0.00 4.666±3.38 3.141±0.00 3.766±3.29 0.907±0.08 N/A 0.594±0.00 3.426±1.70 2.735±0.00 3.489±1.95
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002797 ENSMUST00000002874 N/A 0.276±0.00 1.182±0.06 9.472±12.41 N/A 0.288±0.00 0.981±0.08 1.336±0.00 0.778±0.28 N/A 2.096±0.54 13.288±7.31 2.417±2.64 8.840±10.05
ENSMUST00000131475 0.211±0.13 0.138±0.07 0.386±0.02 0.594±0.39 0.166±0.05 0.154±0.07 0.825±0.03 0.703±0.48 0.257±0.11 0.191±0.00 0.862±0.06 1.355±0.30 0.178±0.09 0.726±0.35
ENSMUST00000136527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038058 ENSMUST00000060655 16.847±3.39 11.047±1.35 7.690±0.33 0.671±0.24 23.270±3.40 9.164±2.86 8.027±0.51 5.832±0.74 2.464±0.84 31.810±4.22 3.375±0.35 11.200±6.46 1.381±0.85 0.335±0.15
ENSMUST00000168172 4.765±0.00 N/A N/A 0.350±0.00 2.779±0.00 N/A N/A N/A 0.333±0.00 N/A N/A 3.448±1.17 N/A 0.111±0.00

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