C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00040I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100055-ENSG00000166897 CGP 9606 22:37282027-37427470
GeneTranscriptPositionBiotype
ENSG00000100055 (CYTH4)
cytohesin 4 		ENST00000248901 (CYTH4-001) 37282383-37315345 protein_coding
ENST00000402997 (CYTH4-008) 37282475-37300173 protein_coding
ENST00000405206 (CYTH4-009) 37282487-37300271 protein_coding
ENST00000439667 (CYTH4-010) 37282531-37302019 processed_transcript
ENST00000446506 (CYTH4-013) 37309968-37313638 protein_coding
ENST00000447919 (CYTH4-011) 37300882-37303295 processed_transcript
ENST00000457992 (CYTH4-014) 37282027-37297682 protein_coding
ENST00000462927 (CYTH4-002) 37282525-37315341 retained_intron
ENST00000467664 (CYTH4-007) 37292144-37294692 retained_intron
ENST00000469886 (CYTH4-004) 37282515-37298402 retained_intron
ENST00000480510 (CYTH4-006) 37282527-37296603 retained_intron
ENSG00000166897 (ELFN2)
extracellular leucine-rich repeat and fibronectin type III domain containing 2 		ENST00000402918 (ELFN2-001) 37367960-37427470 protein_coding
ENST00000414347 (ELFN2-006) 37375705-37418953 processed_transcript
ENST00000415408 (ELFN2-002) 37375763-37427470 processed_transcript
ENST00000424973 (ELFN2-004) 37375705-37420491 processed_transcript
ENST00000435824 (ELFN2-005) 37375731-37420445 processed_transcript
ENST00000451509 (ELFN2-003) 37375763-37427003 processed_transcript
ENST00000613079 (ELFN2-201) 37367961-37427470 protein_coding
ENSG00000237862 (RP1-63G5.7)
 ENST00000445088 (RP1-63G5.7-001) 37352190-37354839 sense_intronic
ENSG00000243902 (RP1-63G5.5)
 ENST00000430883 (RP1-63G5.5-001) 37339583-37385283 sense_overlapping
ENST00000452946 (RP1-63G5.5-002) 37340644-37427445 sense_overlapping
ENSG00000272694 (RP1-63G5.8)
 ENST00000609322 (RP1-63G5.8-001) 37371684-37372858 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_00040I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018008-ENSMUSG00000043460 CGP 10090 15:78597047-78718113
GeneTranscriptPositionBiotype
ENSMUSG00000018008 (Cyth4)
cytohesin 4 		ENSMUST00000043069 (Cyth4-201) 78597047-78622019 protein_coding
ENSMUSG00000043460 (Elfn2)
leucine rich repeat and fibronectin type III, extracellular 2 		ENSMUST00000088592 (Elfn2-201) 78670022-78718113 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040I_0001ENSG00000100055ENST00000248901ENST00000402997ENST00000405206ENST00000439667ENST00000446506ENST00000447919ENST00000457992ENST00000462927ENST00000467664ENST00000469886ENST00000480510ENSG00000166897ENST00000402918ENST00000414347ENST00000415408ENST00000424973ENST00000435824ENST00000451509ENST00000613079ENSG00000237862ENST00000445088ENSG00000243902ENST00000430883ENST00000452946ENSG00000272694ENST00000609322CIL_00040I_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000043460ENSMUST00000088592
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00040I_0001ENSG00000100055ENST00000248901ENST00000405206ENST00000439667ENST00000446506ENST00000462927ENSG00000166897ENST00000402918ENST00000415408ENST00000435824ENST00000613079ENSG00000237862ENST00000445088ENSG00000243902ENST00000430883ENSG00000272694ENST00000609322CIL_00040I_0002ENSMUSG00000018008ENSMUST00000043069ENSMUSG00000043460ENSMUST00000088592
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100055 ENST00000248901 1.136±0.00 9.587±0.00 N/A 0.911±0.39 1.995±0.73 0.296±0.10 0.379±0.00 0.611±0.24 0.535±0.00 5.832±0.00 N/A 1.644±0.72 14.096±3.12 0.635±0.00
ENST00000402997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405206 N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 1.965±0.00 2.525±0.00 N/A N/A N/A N/A
ENST00000439667 N/A N/A N/A N/A 2.168±0.00 N/A N/A N/A N/A N/A 1.048±0.66 N/A N/A N/A
ENST00000446506 N/A N/A N/A N/A N/A N/A N/A 0.657±0.00 N/A 2.953±0.00 0.309±0.00 N/A N/A N/A
ENST00000447919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462927 0.430±0.00 N/A N/A N/A 0.682±0.00 0.253±0.00 N/A N/A N/A 3.094±0.00 N/A 0.524±0.30 N/A 0.495±0.00
ENST00000467664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166897 ENST00000402918 N/A N/A N/A 0.847±0.00 0.003±0.00 N/A 0.005±0.00 0.019±0.00 0.003±0.00 N/A 0.004±0.00 0.454±0.00 0.010±0.00 1.023±0.00
ENST00000414347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415408 N/A N/A N/A N/A 0.124±0.00 N/A N/A 0.619±0.00 N/A N/A N/A N/A N/A N/A
ENST00000424973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A
ENST00000451509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613079 N/A N/A N/A 1.855±0.00 0.004±0.00 N/A 0.005±0.00 0.019±0.00 0.003±0.00 N/A 0.004±0.00 0.464±0.00 0.010±0.00 1.385±0.00
ENSG00000237862 ENST00000445088 N/A N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A 0.184±0.12 N/A 17.861±15.28
ENSG00000243902 ENST00000430883 N/A N/A N/A 2.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272694 ENST00000609322 0.127±0.00 N/A N/A N/A 0.070±0.00 0.261±0.00 N/A N/A N/A N/A N/A 0.410±0.00 N/A 12.181±2.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018008 ENSMUST00000043069 9.349±2.68 5.194±1.28 5.381±0.83 1.338±0.41 22.772±9.44 5.216±2.02 2.334±1.06 3.526±0.74 3.182±1.95 12.985±2.15 0.802±0.69 9.311±2.80 1.344±0.65 0.351±0.26
ENSMUSG00000043460 ENSMUST00000088592 0.010±0.01 0.846±0.08 0.017±0.00 2.083±0.72 0.051±0.02 1.126±0.40 0.068±0.01 0.013±0.01 0.004±0.00 0.035±0.02 0.017±0.00 0.190±0.07 0.036±0.03 10.576±6.16

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