C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043069 Cyth4-201 ENSMUSG00000018008 10090 + 15:78597047-78622019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043069 9.349±2.68 5.194±1.28 5.381±0.83 1.338±0.41 22.772±9.44 5.216±2.02 2.334±1.06 3.526±0.74 3.182±1.95 12.985±2.15 0.802±0.69 9.311±2.80 1.344±0.65 0.351±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000486 CIL_000486_0002 CGP 15:78559169-78622019
CIL_00040I CIL_00040I_0002 CGP 15:78597047-78718113

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 ISS ARF guanyl-nucleotide exchange factor activity
GO:0005886 ISS plasma membrane
GO:0008289 IEA lipid binding
GO:0030155 IBA regulation of cell adhesion
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248901 CYTH4-001 protein_coding Homo_sapiens 0 1363
ENST00000402997 CYTH4-008 protein_coding Homo_sapiens 0 477
ENST00000405206 CYTH4-009 protein_coding Homo_sapiens 0 475
ENST00000439667 CYTH4-010 processed_transcript Homo_sapiens 0 612
ENST00000457992 CYTH4-014 protein_coding Homo_sapiens 0 370
ENST00000462927 CYTH4-002 retained_intron Homo_sapiens 0 787
ENST00000467664 CYTH4-007 retained_intron Homo_sapiens 4e-25 119
ENST00000469886 CYTH4-004 retained_intron Homo_sapiens 0 364
ENST00000480510 CYTH4-006 retained_intron Homo_sapiens 0 237

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