C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032079-ENSDARG00000068257 CGP 7955 15:41713542-41818560
GeneTranscriptPositionBiotype
ENSDARG00000032079 (acsl3a)
acyl-CoA synthetase long-chain family member 3a 		ENSDART00000042884 (acsl3a-201) 41726616-41796703 protein_coding
ENSDART00000152222 (acsl3a-001) 41713542-41796703 protein_coding
ENSDARG00000068257 (kcne4)
potassium voltage-gated channel, Isk-related family, member 4 		ENSDART00000098621 (kcne4-201) 41815123-41815623 protein_coding
ENSDART00000141125 (kcne4-001) 41811205-41818560 protein_coding
ENSDARG00000098028 (si:dkeyp-109h9.4)
si:dkeyp-109h9.4 		ENSDART00000156462 (si:dkeyp-109h9.4-001) 41792084-41837352 antisense
CIL_00041H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123983-ENSG00000152049 CGP 9606 2:222860934-223198399
GeneTranscriptPositionBiotype
ENSG00000123983 (ACSL3)
acyl-CoA synthetase long-chain family member 3 		ENST00000357430 (ACSL3-001) 222860934-222944639 protein_coding
ENST00000392066 (ACSL3-002) 222860942-222942222 protein_coding
ENST00000407441 (ACSL3-007) 222924554-222941527 protein_coding
ENST00000413316 (ACSL3-003) 222861563-222909036 protein_coding
ENST00000421680 (ACSL3-005) 222920954-222927053 protein_coding
ENST00000463813 (ACSL3-004) 222917688-222919104 retained_intron
ENST00000474422 (ACSL3-008) 222930611-222933723 retained_intron
ENST00000495541 (ACSL3-009) 222933018-222941824 retained_intron
ENST00000535678 (ACSL3-010) 222861026-222909059 protein_coding
ENST00000540115 (ACSL3-012) 222909616-222921353 protein_coding
ENST00000542810 (ACSL3-011) 222909085-222916680 retained_intron
ENSG00000152049 (KCNE4)
potassium voltage-gated channel, Isk-related family, member 4 		ENST00000281830 (KCNE4-001) 223051814-223055637 protein_coding
ENST00000488477 (KCNE4-002) 223052200-223198399 processed_transcript
ENSG00000224121 (ATG12P2)
autophagy related 12 pseudogene 2 		ENST00000456830 (ATG12P2-001) 222904640-222905055 processed_pseudogene
ENSG00000265621 (AC013476.1)
 ENST00000582868 (AC013476.1-201) 222932594-222932683 miRNA
ENSG00000278083 (RP11-525G12.1)
 ENST00000614456 (RP11-525G12.1-001) 222945930-222946388 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041H_0001ENSDARG00000032079ENSDART00000042884ENSDART00000152222ENSDARG00000068257ENSDART00000098621ENSDART00000141125ENSDARG00000098028ENSDART00000156462CIL_00041H_0002ENSG00000123983ENST00000357430ENST00000392066ENST00000407441ENST00000413316ENST00000421680ENST00000463813ENST00000474422ENST00000495541ENST00000535678ENST00000540115ENST00000542810ENSG00000152049ENST00000281830ENST00000488477ENSG00000224121ENST00000456830ENSG00000265621ENST00000582868ENSG00000278083ENST00000614456
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041H_0001ENSDARG00000032079ENSDART00000042884ENSDART00000152222ENSDARG00000068257ENSDART00000098621ENSDART00000141125ENSDARG00000098028ENSDART00000156462CIL_00041H_0002ENSG00000123983ENST00000357430ENST00000392066ENST00000407441ENST00000495541ENSG00000152049ENST00000281830ENST00000488477ENSG00000224121ENST00000456830ENSG00000265621ENST00000582868ENSG00000278083ENST00000614456
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032079 ENSDART00000042884 N/A N/A N/A 0.318±0.00 N/A N/A 0.116±0.00 0.239±0.00 N/A N/A 0.324±0.00 N/A N/A N/A
ENSDART00000152222 N/A N/A N/A N/A N/A N/A 0.345±0.00 N/A 0.093±0.00 N/A N/A N/A N/A N/A
ENSDARG00000068257 ENSDART00000098621 N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A 0.639±0.00 N/A 9.806±0.00 N/A N/A N/A
ENSDART00000141125 N/A N/A N/A 1.372±0.47 N/A N/A 4.727±2.50 1.011±0.25 0.029±0.00 N/A 5.373±0.00 N/A N/A N/A
ENSDARG00000098028 ENSDART00000156462 N/A N/A N/A N/A N/A N/A 14.337±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123983 ENST00000357430 2.111±0.00 N/A N/A 12.455±4.28 1.173±0.21 2.377±0.00 3.359±0.35 2.287±0.00 3.272±1.21 3.566±1.78 N/A 5.746±0.90 3.301±0.77 2.525±0.00
ENST00000392066 6.131±0.00 3.977±0.00 4.708±0.00 9.354±0.09 6.659±1.68 3.713±0.00 5.100±0.00 9.196±0.24 5.697±4.09 9.233±0.54 2.775±0.22 8.825±4.42 12.325±1.91 9.698±1.79
ENST00000407441 N/A N/A N/A N/A 16.015±0.00 N/A N/A N/A N/A N/A N/A 23.047±0.00 15.083±0.00 18.004±0.00
ENST00000413316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495541 N/A 5.709±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152049 ENST00000281830 4.076±0.00 9.481±0.00 1.068±0.00 1.211±0.67 2.309±0.32 2.504±1.72 1.495±1.14 1.252±1.23 4.107±3.92 1.035±0.38 1.073±0.24 3.909±1.38 2.966±0.13 4.019±3.34
ENST00000488477 N/A N/A N/A 1.174±1.06 1.318±0.00 N/A 0.731±0.65 1.528±0.00 0.719±0.00 0.862±0.00 N/A N/A N/A 1.353±0.00
ENSG00000224121 ENST00000456830 0.065±0.00 N/A 0.176±0.00 N/A N/A N/A N/A 0.420±0.00 0.151±0.01 0.333±0.25 N/A 0.074±0.00 N/A N/A
ENSG00000265621 ENST00000582868 N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278083 ENST00000614456 N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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