C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155324-ENSG00000164904 CGP 9606 5:126360132-126595418
GeneTranscriptPositionBiotype
ENSG00000155324 (GRAMD3)
GRAM domain containing 3 		ENST00000285689 (GRAMD3-001) 126423146-126494371 protein_coding
ENST00000502348 (GRAMD3-007) 126462345-126493005 protein_coding
ENST00000503702 (GRAMD3-014) 126492938-126496494 processed_transcript
ENST00000504859 (GRAMD3-013) 126472238-126483646 retained_intron
ENST00000505441 (GRAMD3-011) 126465152-126472305 retained_intron
ENST00000505720 (GRAMD3-016) 126423472-126469725 processed_transcript
ENST00000506445 (GRAMD3-009) 126371313-126483549 protein_coding
ENST00000508523 (GRAMD3-012) 126480017-126483549 retained_intron
ENST00000509882 (GRAMD3-018) 126465146-126477783 processed_transcript
ENST00000511134 (GRAMD3-008) 126465155-126493202 protein_coding
ENST00000512579 (GRAMD3-017) 126480094-126485752 processed_transcript
ENST00000513040 (GRAMD3-002) 126360132-126493608 protein_coding
ENST00000513913 (GRAMD3-015) 126423409-126469730 processed_transcript
ENST00000513978 (GRAMD3-005) 126423472-126493326 nonsense_mediated_decay
ENST00000514099 (GRAMD3-006) 126423472-126493166 nonsense_mediated_decay
ENST00000514932 (GRAMD3-010) 126423406-126472304 processed_transcript
ENST00000515200 (GRAMD3-004) 126423146-126494371 protein_coding
ENST00000542322 (GRAMD3-201) 126423177-126494161 protein_coding
ENST00000544396 (GRAMD3-202) 126423177-126494161 protein_coding
ENSG00000164904 (ALDH7A1)
aldehyde dehydrogenase 7 family, member A1 		ENST00000409134 (ALDH7A1-001) 126541841-126595418 protein_coding
ENST00000412186 (ALDH7A1-002) 126583946-126595362 nonsense_mediated_decay
ENST00000413020 (ALDH7A1-006) 126564514-126595218 processed_transcript
ENST00000433026 (ALDH7A1-005) 126564376-126580090 processed_transcript
ENST00000447989 (ALDH7A1-201) 126541843-126595390 protein_coding
ENST00000458249 (ALDH7A1-004) 126568259-126595198 nonsense_mediated_decay
ENST00000476328 (ALDH7A1-009) 126549892-126552102 retained_intron
ENST00000479989 (ALDH7A1-003) 126583932-126594439 processed_transcript
ENST00000485852 (ALDH7A1-008) 126544739-126550164 retained_intron
ENST00000497231 (ALDH7A1-010) 126544757-126562205 retained_intron
ENST00000503281 (ALDH7A1-013) 126552021-126595112 processed_transcript
ENST00000509270 (ALDH7A1-015) 126577184-126595219 protein_coding
ENST00000509459 (ALDH7A1-014) 126556007-126595071 processed_transcript
ENST00000510111 (ALDH7A1-016) 126568324-126595192 protein_coding
ENST00000511266 (ALDH7A1-012) 126575437-126595153 processed_transcript
ENST00000553117 (ALDH7A1-017) 126544596-126595336 protein_coding
ENSG00000250602 (RP11-517I3.1)
 ENST00000512500 (RP11-517I3.1-002) 126480411-126490371 antisense
ENST00000512779 (RP11-517I3.1-003) 126458787-126467631 antisense
ENST00000515808 (RP11-517I3.1-001) 126433505-126490352 antisense
ENSG00000279118 (RP11-517I3.2)
 ENST00000624769 (RP11-517I3.2-001) 126496279-126498604 TEC
CIL_00041O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001700-ENSMUSG00000053644 CGP 10090 18:56432132-56572951
GeneTranscriptPositionBiotype
ENSMUSG00000001700 (Gramd3)
GRAM domain containing 3 		ENSMUST00000070166 (Gramd3-201) 56432132-56503792 protein_coding
ENSMUSG00000008301 (Phax)
phosphorylated adaptor for RNA export 		ENSMUST00000008445 (Phax-001) 56572822-56587712 protein_coding
ENSMUST00000130163 (Phax-002) 56562443-56587189 protein_coding
ENSMUST00000132628 (Phax-003) 56562593-56580300 protein_coding
ENSMUSG00000053644 (Aldh7a1)
aldehyde dehydrogenase family 7, member A1 		ENSMUST00000066208 (Aldh7a1-002) 56526744-56562309 protein_coding
ENSMUST00000168517 (Aldh7a1-004) 56532539-56537617 retained_intron
ENSMUST00000170309 (Aldh7a1-006) 56537248-56562226 protein_coding
ENSMUST00000171844 (Aldh7a1-005) 56550367-56562197 protein_coding
ENSMUST00000171851 (Aldh7a1-003) 56546920-56559422 retained_intron
ENSMUST00000172734 (Aldh7a1-007) 56526605-56562328 protein_coding
ENSMUST00000172902 (Aldh7a1-009) 56509687-56526849 processed_transcript
ENSMUST00000174518 (Aldh7a1-001) 56524722-56572951 protein_coding
ENSMUST00000174704 (Aldh7a1-008) 56526750-56562218 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041O_0001ENSG00000155324ENST00000285689ENST00000502348ENST00000504859ENST00000505441ENST00000506445ENST00000512579ENST00000513040ENST00000513978ENST00000514099ENST00000515200ENST00000542322ENST00000544396ENSG00000164904ENST00000409134ENST00000413020ENST00000458249ENST00000485852ENST00000497231ENST00000503281ENST00000509459ENST00000511266ENST00000553117ENSG00000250602ENST00000512500ENSG00000279118ENST00000624769CIL_00041O_0002ENSMUSG00000001700ENSMUST00000070166ENSMUSG00000008301ENSMUST00000008445ENSMUST00000130163ENSMUST00000132628ENSMUSG00000053644ENSMUST00000066208ENSMUST00000174518ENSMUST00000174704
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155324 ENST00000285689 N/A N/A 1.130±0.00 2.425±0.00 N/A N/A N/A N/A N/A N/A N/A 3.621±0.82 11.211±0.00 N/A
ENST00000502348 N/A N/A N/A N/A N/A 2.997±0.00 N/A N/A 1.335±0.00 N/A N/A N/A N/A N/A
ENST00000503702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504859 N/A N/A N/A N/A N/A N/A N/A N/A 3.600±0.00 N/A N/A N/A N/A N/A
ENST00000505441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.145±0.00 N/A N/A N/A
ENST00000505720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506445 N/A N/A N/A N/A N/A 2.301±0.00 N/A 1.305±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512579 N/A N/A N/A 10.321±0.00 N/A N/A N/A N/A 4.397±0.00 5.383±0.00 N/A N/A N/A N/A
ENST00000513040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 2.720±0.00 N/A N/A
ENST00000513913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513978 N/A N/A N/A 7.420±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514099 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A
ENST00000514932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515200 N/A N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 0.911±0.00 N/A N/A N/A N/A
ENST00000542322 N/A 2.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.922±0.00
ENST00000544396 3.889±0.00 N/A 1.205±0.00 10.976±0.00 3.413±0.00 4.274±1.61 N/A 4.560±4.05 1.657±0.00 4.250±0.00 0.486±0.00 6.237±4.94 4.367±0.81 0.948±0.20
ENSG00000164904 ENST00000409134 0.759±0.00 0.906±0.00 1.745±0.00 15.495±0.00 2.851±0.00 0.279±0.00 0.933±0.78 2.297±0.40 N/A 0.629±0.23 N/A 4.926±2.78 4.952±4.01 2.451±0.31
ENST00000412186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413020 N/A N/A 5.279±0.00 N/A 1.031±0.00 N/A N/A 11.563±0.00 3.351±0.00 N/A N/A N/A 17.085±6.39 N/A
ENST00000433026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458249 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.946±0.00 N/A N/A N/A N/A
ENST00000476328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485852 N/A 4.663±0.00 N/A N/A N/A N/A 1.923±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497231 N/A N/A N/A N/A 0.468±0.00 2.176±0.00 0.342±0.00 N/A 0.895±0.00 N/A 0.454±0.00 0.828±0.00 N/A N/A
ENST00000503281 7.185±0.00 5.164±0.00 4.039±0.00 N/A 8.154±6.68 N/A 6.482±0.00 21.600±0.00 13.739±0.00 5.658±0.00 1.698±1.28 20.678±2.96 83.983±0.00 13.288±0.00
ENST00000509270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509459 N/A N/A N/A N/A N/A 4.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.329±0.00 115.460±0.00 11.055±0.00
ENST00000553117 7.363±0.00 3.543±0.00 2.278±0.00 13.026±10.41 9.847±0.00 3.982±2.50 4.491±0.00 11.599±6.40 10.112±0.00 3.779±0.00 0.846±0.52 9.356±6.32 24.951±23.84 8.013±1.23
ENSG00000250602 ENST00000512500 N/A 4.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279118 ENST00000624769 2.268±0.00 1.444±0.00 N/A 6.136±2.12 0.965±0.37 N/A 2.563±0.00 2.025±1.15 0.810±0.28 1.186±0.47 0.367±0.16 1.683±0.00 N/A 0.934±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001700 ENSMUST00000070166 5.714±0.46 2.247±0.51 8.291±0.69 2.305±0.17 3.564±0.90 10.648±2.61 3.926±0.98 6.085±0.76 4.635±2.63 2.633±0.22 3.757±0.36 4.376±1.53 8.737±2.14 2.823±1.33
ENSMUSG00000008301 ENSMUST00000008445 7.814±1.92 7.376±0.34 12.972±0.56 23.548±1.83 5.583±0.39 5.077±1.03 3.533±0.34 N/A 10.881±1.54 6.944±0.47 3.472±0.50 11.080±4.29 20.065±4.43 3.792±0.25
ENSMUST00000130163 N/A N/A N/A 24.035±0.00 N/A N/A N/A N/A N/A N/A 4.240±0.72 19.709±7.22 34.961±17.61 8.198±0.00
ENSMUST00000132628 N/A N/A N/A 64.525±0.00 N/A N/A N/A N/A N/A N/A N/A 83.523±0.00 75.858±3.98 18.774±0.00
ENSMUSG00000053644 ENSMUST00000066208 34.251±9.01 20.978±3.58 28.125±0.18 15.890±1.33 18.663±1.87 7.573±1.09 10.628±0.55 181.070±7.98 124.568±69.95 18.298±0.87 10.865±1.34 38.264±9.86 94.620±69.54 16.569±1.71
ENSMUST00000168517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174518 3.012±0.74 N/A 3.299±0.06 3.142±0.60 2.147±0.37 1.151±0.04 1.284±0.17 N/A N/A 2.462±0.56 1.189±0.12 4.151±0.77 N/A 2.079±0.35
ENSMUST00000174704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.380±0.00 24.989±6.79 5.300±0.00

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