C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylated adaptor for RNA export
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130163 Phax-002 ENSMUSG00000008301 10090 + 18:56562443-56587189 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000130163
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000130163 24.035±0.00 4.240±0.72 19.709±7.22 34.961±17.61 8.198±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041O CIL_00041O_0002 CGP 18:56432132-56572951
CIL_0000HH CIL_0000HH_0003 CGP 18:56509687-56587712
CIL_00041P CIL_00041P_0002 CGP 18:56562443-56594782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006408 IDA snRNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297540 PHAX-001 protein_coding Homo_sapiens 0 974
ENST00000511371 PHAX-007 retained_intron Homo_sapiens 0 531
ENST00000513813 PHAX-005 retained_intron Homo_sapiens 0 368

Loading