C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00042S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103522-ENSG00000077235 CGP 9606 16:27402162-27549913
GeneTranscriptPositionBiotype
ENSG00000077235 (GTF3C1)
general transcription factor IIIC, polypeptide 1, alpha 220kDa 		ENST00000356183 (GTF3C1-001) 27460678-27549906 protein_coding
ENST00000561623 (GTF3C1-002) 27460613-27549913 protein_coding
ENST00000562609 (GTF3C1-004) 27461296-27466327 retained_intron
ENST00000564664 (GTF3C1-014) 27471791-27489123 nonsense_mediated_decay
ENST00000564747 (GTF3C1-013) 27460676-27463473 retained_intron
ENST00000566779 (GTF3C1-010) 27480716-27484297 retained_intron
ENST00000567806 (GTF3C1-006) 27459555-27460980 processed_transcript
ENST00000567843 (GTF3C1-007) 27469402-27470719 processed_transcript
ENST00000568569 (GTF3C1-011) 27481115-27488231 protein_coding
ENST00000569394 (GTF3C1-009) 27470223-27478594 retained_intron
ENST00000569653 (GTF3C1-008) 27461097-27502916 protein_coding
ENST00000570129 (GTF3C1-012) 27483138-27486063 processed_transcript
ENST00000571886 (GTF3C1-016) 27470109-27476528 nonsense_mediated_decay
ENSG00000103522 (IL21R)
interleukin 21 receptor 		ENST00000337929 (IL21R-001) 27402162-27452042 protein_coding
ENST00000395754 (IL21R-003) 27427244-27450485 protein_coding
ENST00000561953 (IL21R-004) 27442670-27444690 retained_intron
ENST00000564089 (IL21R-006) 27402174-27450073 protein_coding
ENST00000564583 (IL21R-005) 27443967-27448674 processed_transcript
ENSG00000259954 (IL21R-AS1)
IL21R antisense RNA 1 		ENST00000563191 (IL21R-AS1-001) 27447669-27453393 antisense
CIL_00042S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030745-ENSMUSG00000032777 CGP 10090 7:125603429-125707780
GeneTranscriptPositionBiotype
ENSMUSG00000030745 (Il21r)
interleukin 21 receptor 		ENSMUST00000033000 (Il21r-201) 125603429-125633570 protein_coding
ENSMUSG00000032777 (Gtf3c1)
general transcription factor III C 1 		ENSMUST00000055506 (Gtf3c1-201) 125640955-125707780 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042S_0001ENSG00000077235ENST00000356183ENST00000561623ENST00000562609ENST00000564664ENST00000564747ENST00000566779ENST00000567806ENST00000567843ENST00000568569ENST00000569394ENST00000569653ENST00000570129ENST00000571886ENSG00000103522ENST00000337929ENST00000395754ENST00000561953ENST00000564089ENST00000564583ENSG00000259954ENST00000563191CIL_00042S_0002ENSMUSG00000030745ENSMUST00000033000ENSMUSG00000032777ENSMUST00000055506
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042S_0001ENSG00000077235ENST00000356183ENST00000561623ENST00000567843ENSG00000103522ENST00000337929ENST00000395754ENST00000561953ENST00000564089ENST00000564583ENSG00000259954ENST00000563191CIL_00042S_0002ENSMUSG00000030745ENSMUST00000033000ENSMUSG00000032777ENSMUST00000055506
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077235 ENST00000356183 6.287±0.00 5.906±0.00 N/A 5.628±4.00 7.054±0.00 4.489±0.00 6.741±0.00 9.016±0.00 2.767±0.00 5.118±0.00 4.954±3.92 5.795±3.00 3.762±0.21 9.959±1.35
ENST00000561623 2.818±0.00 N/A 2.438±0.00 2.674±0.09 2.188±0.00 2.392±0.00 2.317±0.61 1.542±0.00 2.302±0.00 3.599±0.00 6.392±0.00 5.480±3.57 4.060±1.02 3.491±0.00
ENST00000562609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.693±0.00 N/A N/A
ENST00000568569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103522 ENST00000337929 0.054±0.00 0.472±0.00 N/A N/A 0.169±0.14 0.110±0.00 0.026±0.00 N/A 0.054±0.03 0.405±0.00 N/A 0.092±0.06 0.154±0.00 N/A
ENST00000395754 N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A 0.566±0.00 N/A N/A 0.627±0.00 N/A
ENST00000561953 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.789±0.00 N/A N/A N/A 3.854±2.80
ENST00000564089 N/A N/A N/A 0.016±0.00 N/A 0.033±0.00 N/A N/A N/A 0.508±0.00 N/A N/A N/A N/A
ENST00000564583 N/A N/A N/A N/A N/A N/A 0.161±0.00 N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENSG00000259954 ENST00000563191 0.114±0.00 1.673±0.00 N/A 0.333±0.29 0.169±0.08 0.066±0.00 0.069±0.02 0.580±0.00 0.047±0.00 0.859±0.00 0.013±0.00 0.240±0.15 0.369±0.24 2.131±1.46
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030745 ENSMUST00000033000 0.861±0.46 0.828±0.32 0.551±0.21 0.168±0.06 18.306±9.51 1.377±0.63 0.461±0.07 0.958±0.69 0.665±0.42 2.145±0.38 0.608±0.97 1.187±0.50 0.655±0.36 0.039±0.02
ENSMUSG00000032777 ENSMUST00000055506 8.085±2.35 14.000±1.19 6.390±0.23 23.709±10.87 8.100±2.14 11.464±4.48 6.955±1.77 10.657±1.39 4.706±1.50 14.841±1.33 6.926±0.39 23.960±8.98 11.331±6.16 12.979±3.86

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