C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000074319-ENSG00000151116 CGP 9606 11:18468336-18588747
GeneTranscriptPositionBiotype
ENSG00000074319 (TSG101)
tumor susceptibility 101 		ENST00000251968 (TSG101-001) 18480311-18527232 protein_coding
ENST00000438874 (TSG101-008) 18502543-18526899 processed_transcript
ENST00000535077 (TSG101-005) 18506866-18526920 processed_transcript
ENST00000536719 (TSG101-002) 18468336-18526951 protein_coding
ENST00000540555 (TSG101-007) 18481491-18484061 retained_intron
ENST00000542488 (TSG101-003) 18506857-18526821 processed_transcript
ENST00000543054 (TSG101-011) 18483936-18514850 retained_intron
ENST00000543087 (TSG101-004) 18490830-18514843 processed_transcript
ENST00000544804 (TSG101-009) 18502485-18526881 processed_transcript
ENST00000545247 (TSG101-006) 18483836-18526913 retained_intron
ENST00000580814 (TSG101-016) 18469031-18481731 nonsense_mediated_decay
ENST00000584526 (TSG101-015) 18475219-18481771 nonsense_mediated_decay
ENSG00000256361 (RP11-613F22.6)
 ENST00000538408 (RP11-613F22.6-001) 18511043-18511475 processed_pseudogene
ENSG00000256588 (RP11-613F22.8)
 ENST00000539313 (RP11-613F22.8-001) 18507608-18508820 sense_intronic
ENSG00000274589 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616888 (Metazoa_SRP.1-286) 18538885-18539189 misc_RNA
CIL_00044S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014402-ENSMUSG00000043262 CGP 10090 7:46888949-46958527
GeneTranscriptPositionBiotype
ENSMUSG00000014402 (Tsg101)
tumor susceptibility gene 101 		ENSMUST00000014546 (Tsg101-001) 46888949-46919969 protein_coding
ENSMUST00000140693 (Tsg101-004) 46906589-46909045 retained_intron
ENSMUST00000143413 (Tsg101-002) 46907051-46919937 protein_coding
ENSMUST00000146130 (Tsg101-005) 46889027-46891027 processed_transcript
ENSMUST00000156335 (Tsg101-003) 46901025-46914410 protein_coding
ENSMUSG00000043262 (Uevld)
UEV and lactate/malate dehyrogenase domains 		ENSMUST00000094398 (Uevld-001) 46923539-46958527 protein_coding
ENSMUST00000125026 (Uevld-003) 46947645-46958472 retained_intron
ENSMUST00000131183 (Uevld-002) 46923539-46958527 nonsense_mediated_decay
ENSMUST00000133063 (Uevld-004) 46946001-46956037 retained_intron
ENSMUST00000133914 (Uevld-005) 46948018-46958501 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044S_0001ENSG00000074319ENST00000251968ENST00000438874ENST00000535077ENST00000536719ENST00000540555ENST00000542488ENST00000543054ENST00000543087ENST00000544804ENST00000545247ENST00000580814ENST00000584526ENSG00000256361ENST00000538408ENSG00000256588ENST00000539313ENSG00000274589ENST00000616888CIL_00044S_0002ENSMUSG00000014402ENSMUST00000014546ENSMUST00000140693ENSMUST00000143413ENSMUST00000146130ENSMUST00000156335ENSMUSG00000043262ENSMUST00000094398ENSMUST00000125026ENSMUST00000131183ENSMUST00000133063ENSMUST00000133914
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044S_0001ENSG00000074319ENST00000251968ENST00000540555ENST00000543054ENST00000545247ENST00000580814ENSG00000256361ENST00000538408ENSG00000256588ENST00000539313ENSG00000274589ENST00000616888CIL_00044S_0002ENSMUSG00000014402ENSMUST00000014546ENSMUST00000156335ENSMUSG00000043262ENSMUST00000094398ENSMUST00000131183
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074319 ENST00000251968 20.752±0.00 16.059±0.00 2.685±0.00 13.348±7.41 13.010±9.08 12.081±6.60 12.606±10.98 17.961±16.07 7.737±3.75 9.178±6.35 19.153±0.00 19.585±7.60 27.315±13.09 30.625±16.21
ENST00000438874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540555 N/A N/A N/A N/A 3.939±0.00 10.980±0.00 N/A 2.253±0.00 N/A 14.726±0.00 7.307±0.00 26.074±15.06 41.259±0.00 50.407±0.00
ENST00000542488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543054 N/A N/A N/A 9.247±0.00 N/A N/A N/A N/A N/A 6.475±0.00 11.062±1.75 11.501±0.00 12.788±0.00 N/A
ENST00000543087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545247 N/A N/A N/A N/A N/A N/A 1.719±0.00 N/A N/A N/A 2.591±0.00 3.412±0.00 N/A N/A
ENST00000580814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.597±0.00 N/A N/A N/A
ENST00000584526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256361 ENST00000538408 0.077±0.00 0.591±0.00 1.921±0.00 0.262±0.14 2.006±1.96 3.963±0.00 0.575±0.00 0.332±0.31 3.185±0.00 2.748±0.00 N/A 0.102±0.00 0.165±0.00 0.110±0.01
ENSG00000256588 ENST00000539313 0.150±0.00 0.398±0.00 0.921±0.00 0.368±0.08 0.534±0.21 0.119±0.00 0.043±0.00 0.231±0.00 0.199±0.14 2.404±2.25 0.053±0.00 1.945±2.36 N/A 0.225±0.08
ENSG00000274589 ENST00000616888 0.190±0.00 0.439±0.00 N/A 0.215±0.00 0.744±0.00 0.222±0.00 0.184±0.00 N/A 0.113±0.00 0.278±0.00 0.057±0.00 0.570±0.00 0.426±0.00 0.394±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014402 ENSMUST00000014546 8.917±1.61 5.799±1.27 7.101±0.35 18.578±7.67 9.817±4.48 12.626±6.69 5.059±1.97 9.381±4.62 5.569±3.49 7.600±1.47 5.001±1.79 26.069±9.88 23.487±8.87 4.156±0.78
ENSMUST00000140693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156335 N/A N/A N/A N/A 7.886±0.00 N/A 7.811±0.00 N/A 4.721±0.22 N/A N/A N/A N/A N/A
ENSMUSG00000043262 ENSMUST00000094398 4.146±0.47 2.392±0.56 4.378±0.40 1.904±0.64 3.222±0.44 2.640±0.63 1.790±0.15 3.011±0.27 3.078±0.74 3.082±0.52 1.855±0.35 3.404±0.98 7.947±2.72 1.343±0.55
ENSMUST00000125026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131183 0.497±0.00 N/A N/A 0.340±0.00 N/A N/A 0.319±0.00 N/A N/A 0.433±0.00 N/A N/A N/A 0.310±0.00
ENSMUST00000133063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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