C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor susceptibility 101
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251968 TSG101-001 ENSG00000074319 9606 - 11:18480311-18527232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251968
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251968 20.752±0.00 16.059±0.00 2.685±0.00 13.348±7.41 13.010±9.08 12.081±6.60 12.606±10.98 17.961±16.07 7.737±3.75 9.178±6.35 19.153±0.00 19.585±7.60 27.315±13.09 30.625±16.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044S CIL_00044S_0001 CGP 11:18468336-18588747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 IDA ESCRT I complex
GO:0001558 IEA regulation of cell growth
GO:0003677 TAS DNA binding
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 ISS cytoplasm
GO:0005769 IDA early endosome
GO:0005770 IMP late endosome
GO:0005771 TAS multivesicular body
GO:0005886 IDA plasma membrane
GO:0006464 IEA cellular protein modification process
GO:0007050 IEA cell cycle arrest
GO:0008285 IEA negative regulation of cell proliferation
GO:0010008 TAS endosome membrane
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0019068 TAS virion assembly
GO:0019082 TAS viral protein processing
GO:0030154 IEA cell differentiation
GO:0030216 IEA keratinocyte differentiation
GO:0031625 IPI ubiquitin protein ligase binding
GO:0042803 IPI protein homodimerization activity
GO:0043130 TAS ubiquitin binding
GO:0043162 IDA ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046755 ISS viral budding
GO:0048306 IPI calcium-dependent protein binding
GO:0051301 IEA cell division
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0075733 TAS intracellular transport of virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014546 Tsg101-001 protein_coding Mus_musculus 0 1718
ENSMUST00000156335 Tsg101-003 protein_coding Mus_musculus 0 745
ENSMUST00000143413 Tsg101-002 protein_coding Mus_musculus 0 353
ENSMUST00000146130 Tsg101-005 processed_transcript Mus_musculus 0 322
ENSMUST00000140693 Tsg101-004 retained_intron Mus_musculus 0 320

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