C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor susceptibility 101
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543054 TSG101-011 ENSG00000074319 9606 - 11:18483936-18514850 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungMuscleOvaryPlacentaENST00000543054
Transcript ID Brain Lung Muscle Ovary Placenta
ENST00000543054 9.247±0.00 6.475±0.00 11.062±1.75 11.501±0.00 12.788±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044S CIL_00044S_0001 CGP 11:18468336-18588747

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014546 Tsg101-001 protein_coding Mus_musculus 0 769
ENSMUST00000156335 Tsg101-003 protein_coding Mus_musculus 0 575
ENSMUST00000143413 Tsg101-002 protein_coding Mus_musculus 0 353
ENSMUST00000140693 Tsg101-004 retained_intron Mus_musculus 0 320

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