C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027196-ENSDARG00000037968 CGP 7955 3:32827104-32848256
GeneTranscriptPositionBiotype
ENSDARG00000027196 (BX571714.1)
Uncharacterized protein 		ENSDART00000029262 (BX571714.1-201) 32827104-32832213 protein_coding
ENSDARG00000037968 (fus)
fusion (involved in t(12;16) in malignant liposarcoma) 		ENSDART00000055340 (fus-001) 32835400-32848256 protein_coding
ENSDART00000075244 (fus-201) 32835397-32848250 protein_coding
ENSDART00000142650 (fus-002) 32844116-32845086 retained_intron
CIL_00044X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178226-ENSG00000089280 CGP 9606 16:31138925-31194871
GeneTranscriptPositionBiotype
ENSG00000089280 (FUS)
FUS RNA binding protein 		ENST00000254108 (FUS-001) 31180110-31194871 protein_coding
ENST00000380244 (FUS-008) 31180139-31191602 protein_coding
ENST00000474990 (FUS-004) 31185499-31191102 processed_transcript
ENST00000483853 (FUS-007) 31190373-31191558 retained_intron
ENST00000487045 (FUS-002) 31180139-31183350 retained_intron
ENST00000487509 (FUS-006) 31180150-31191602 retained_intron
ENST00000487974 (FUS-003) 31183550-31184398 retained_intron
ENST00000564766 (FUS-022) 31188467-31189695 retained_intron
ENST00000566605 (FUS-010) 31180138-31191602 nonsense_mediated_decay
ENST00000568685 (FUS-016) 31180151-31191575 protein_coding
ENST00000568901 (FUS-019) 31188152-31190120 retained_intron
ENST00000569760 (FUS-020) 31190216-31191605 retained_intron
ENST00000570090 (FUS-018) 31185080-31187245 retained_intron
ENSG00000178226 (PRSS36)
protease, serine, 36 		ENST00000268281 (PRSS36-001) 31138925-31150094 protein_coding
ENST00000418068 (PRSS36-004) 31138982-31150066 protein_coding
ENST00000561897 (PRSS36-006) 31149101-31150008 retained_intron
ENST00000562368 (PRSS36-002) 31138928-31149534 retained_intron
ENST00000562390 (PRSS36-005) 31149272-31150083 retained_intron
ENST00000563693 (PRSS36-009) 31141464-31142858 retained_intron
ENST00000569305 (PRSS36-003) 31138994-31150061 protein_coding
ENST00000569614 (PRSS36-007) 31148466-31149534 retained_intron
ENST00000571878 (PRSS36-010) 31139067-31140734 nonsense_mediated_decay
ENSG00000262366 (NDUFA3P6)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 pseudogene 6 		ENST00000571486 (NDUFA3P6-001) 31174573-31174822 processed_pseudogene
ENSG00000263343 (RP11-388M20.7)
 ENST00000575892 (RP11-388M20.7-001) 31165648-31165927 processed_pseudogene
CIL_00044X_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070371-ENSMUSG00000030795 CGP 10090 7:127932638-127982368
GeneTranscriptPositionBiotype
ENSMUSG00000030795 (Fus)
fused in sarcoma 		ENSMUST00000077609 (Fus-007) 127967490-127982032 protein_coding
ENSMUST00000106251 (Fus-001) 127967457-127982368 protein_coding
ENSMUST00000121616 (Fus-004) 127967508-127982032 protein_coding
ENSMUST00000123151 (Fus-003) 127971787-127974327 retained_intron
ENSMUST00000128851 (Fus-002) 127967491-127982029 retained_intron
ENSMUST00000136289 (Fus-005) 127975684-127980236 retained_intron
ENSMUST00000137464 (Fus-008) 127967491-127972213 processed_transcript
ENSMUST00000141997 (Fus-006) 127980184-127982007 protein_coding
ENSMUST00000154843 (Fus-009) 127971875-127977271 processed_transcript
ENSMUST00000155941 (Fus-010) 127974143-127978227 retained_intron
ENSMUST00000172755 (Fus-012) 127980216-127981829 retained_intron
ENSMUST00000174196 (Fus-011) 127967491-127974327 retained_intron
ENSMUST00000174632 (Fus-013) 127977314-127981449 protein_coding
ENSMUSG00000070371 (Prss36)
protease, serine 36 		ENSMUST00000094026 (Prss36-201) 127932638-127946725 protein_coding
ENSMUST00000118755 (Prss36-001) 127932638-127946725 protein_coding
ENSMUST00000141385 (Prss36-007) 127932902-127935429 protein_coding
ENSMUST00000144192 (Prss36-005) 127933007-127935514 processed_transcript
ENSMUST00000150591 (Prss36-002) 127932960-127936097 protein_coding
ENSMUST00000152697 (Prss36-003) 127932638-127935519 processed_transcript
ENSMUST00000153110 (Prss36-004) 127932638-127935479 processed_transcript
ENSMUST00000156152 (Prss36-006) 127933416-127935450 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044X_0001ENSDARG00000027196ENSDART00000029262ENSDARG00000037968ENSDART00000055340ENSDART00000075244ENSDART00000142650CIL_00044X_0002ENSG00000089280ENST00000254108ENST00000380244ENST00000474990ENST00000483853ENST00000487045ENST00000487509ENST00000487974ENST00000564766ENST00000566605ENST00000568685ENST00000568901ENST00000569760ENST00000570090ENSG00000178226ENST00000268281ENST00000418068ENST00000561897ENST00000562368ENST00000562390ENST00000563693ENST00000569305ENST00000569614ENST00000571878ENSG00000262366ENST00000571486ENSG00000263343ENST00000575892CIL_00044X_0003ENSMUSG00000030795ENSMUST00000077609ENSMUST00000106251ENSMUST00000121616ENSMUST00000123151ENSMUST00000128851ENSMUST00000136289ENSMUST00000137464ENSMUST00000141997ENSMUST00000154843ENSMUST00000155941ENSMUST00000172755ENSMUST00000174196ENSMUST00000174632ENSMUSG00000070371ENSMUST00000094026ENSMUST00000118755ENSMUST00000141385ENSMUST00000144192ENSMUST00000150591ENSMUST00000152697ENSMUST00000153110ENSMUST00000156152
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044X_0001ENSDARG00000027196ENSDART00000029262ENSDARG00000037968ENSDART00000055340ENSDART00000075244ENSDART00000142650CIL_00044X_0002ENSG00000089280ENST00000254108ENST00000380244ENST00000474990ENST00000487509ENST00000566605ENST00000568685ENST00000568901ENST00000569760ENSG00000178226ENST00000268281ENST00000418068ENST00000562368ENST00000563693ENST00000569305ENST00000571878ENSG00000262366ENST00000571486ENSG00000263343ENST00000575892CIL_00044X_0003ENSMUSG00000030795ENSMUST00000077609ENSMUST00000106251ENSMUST00000121616ENSMUST00000128851ENSMUST00000136289ENSMUST00000174196ENSMUST00000174632ENSMUSG00000070371ENSMUST00000094026ENSMUST00000118755ENSMUST00000150591ENSMUST00000152697ENSMUST00000153110ENSMUST00000156152
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027196 ENSDART00000029262 N/A N/A N/A 0.588±0.18 N/A N/A 0.279±0.16 N/A 0.050±0.00 N/A 2.788±0.00 N/A N/A N/A
ENSDARG00000037968 ENSDART00000055340 N/A N/A N/A 31.792±6.09 N/A N/A 15.701±0.58 4.496±0.00 1.840±0.00 N/A 7.045±0.00 N/A N/A N/A
ENSDART00000075244 N/A N/A N/A 26.388±9.20 N/A N/A 13.658±0.00 3.635±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.104±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089280 ENST00000254108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A
ENST00000380244 28.320±0.00 57.799±0.00 N/A 45.999±0.00 21.945±0.00 15.275±0.00 26.663±0.00 35.378±0.00 7.087±0.00 13.545±0.00 16.012±0.00 100.859±24.86 83.972±21.99 62.960±26.88
ENST00000474990 108.157±0.00 288.326±0.00 N/A 131.635±0.00 74.681±0.00 33.956±0.00 N/A 74.316±0.00 15.461±0.00 17.930±0.00 14.983±0.00 177.989±57.62 41.472±0.00 129.686±0.00
ENST00000483853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487509 N/A 18.555±0.00 2.998±0.00 5.597±0.00 6.776±0.51 4.411±2.03 2.876±2.72 5.054±4.00 1.391±0.01 4.122±1.29 N/A 11.870±6.32 N/A 13.866±8.85
ENST00000487974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566605 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.582±0.00 N/A N/A 33.685±6.25 43.182±0.00
ENST00000568685 32.082±0.00 74.818±0.00 N/A 29.899±0.00 N/A N/A N/A N/A 10.330±0.00 13.455±0.00 11.493±0.00 51.459±18.52 N/A 28.920±0.00
ENST00000568901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 83.276±0.00 N/A 102.970±0.00
ENST00000569760 N/A N/A N/A N/A N/A N/A N/A N/A 24.280±0.00 30.691±0.00 N/A N/A N/A N/A
ENST00000570090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178226 ENST00000268281 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.620±0.00 0.905±0.00 0.275±0.00
ENST00000418068 N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A 0.049±0.00 N/A 0.266±0.11 0.489±0.12 N/A
ENST00000561897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562368 N/A 0.686±0.00 N/A N/A N/A N/A 0.154±0.14 0.574±0.00 0.138±0.00 0.335±0.00 N/A N/A 0.448±0.07 0.498±0.00
ENST00000562390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563693 N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A 0.832±0.00 0.852±0.00
ENST00000569305 0.310±0.00 N/A N/A 0.116±0.00 N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A 0.528±0.00 0.086±0.00
ENST00000569614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571878 N/A 0.879±0.00 N/A 0.735±0.00 N/A 0.083±0.00 0.447±0.00 N/A 0.184±0.01 2.085±0.00 N/A N/A N/A 1.142±0.93
ENSG00000262366 ENST00000571486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.707±0.00
ENSG00000263343 ENST00000575892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030795 ENSMUST00000077609 36.844±14.06 33.516±1.77 68.691±6.49 93.415±29.00 37.904±12.90 28.104±2.33 33.559±7.75 34.806±2.30 68.442±58.63 53.507±9.83 20.605±4.52 64.855±20.50 65.310±23.98 58.288±9.74
ENSMUST00000106251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.629±0.00 N/A N/A
ENSMUST00000121616 119.119±32.75 53.970±14.64 53.499±1.62 124.675±0.00 112.497±25.26 41.582±6.79 73.754±7.07 70.008±11.27 42.380±25.28 77.759±29.29 21.007±3.08 144.988±72.46 68.596±30.24 90.713±23.02
ENSMUST00000123151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128851 15.192±3.23 N/A 27.965±0.00 20.712±9.12 11.838±3.33 N/A 6.294±0.55 5.767±0.17 12.174±6.68 11.234±1.15 4.486±1.87 33.256±16.90 13.500±5.16 10.058±2.61
ENSMUST00000136289 N/A N/A N/A 91.807±0.00 N/A N/A N/A N/A N/A N/A N/A 108.821±0.00 83.697±51.10 N/A
ENSMUST00000137464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174196 12.069±0.00 77.085±29.97 N/A N/A 92.671±19.63 40.102±9.31 N/A 16.404±0.00 8.096±1.10 42.006±18.50 N/A 187.795±53.19 N/A N/A
ENSMUST00000174632 N/A N/A N/A 159.554±0.00 N/A N/A N/A N/A N/A N/A N/A 212.447±0.00 142.899±75.48 148.855±0.00
ENSMUSG00000070371 ENSMUST00000094026 N/A 0.616±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00
ENSMUST00000118755 0.677±0.00 N/A N/A N/A 0.940±0.21 N/A 0.344±0.00 N/A N/A 0.286±0.00 N/A 0.934±0.44 N/A N/A
ENSMUST00000141385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150591 1.982±0.00 1.930±0.04 N/A N/A 2.201±0.00 0.632±0.14 1.218±0.00 N/A N/A 1.582±0.09 N/A 2.493±0.55 N/A 0.747±0.02
ENSMUST00000152697 1.853±0.00 N/A 1.770±0.64 1.337±0.40 2.990±0.23 1.064±0.17 2.116±0.42 3.139±1.27 1.331±0.85 1.519±0.47 0.873±0.13 3.006±0.00 1.410±0.47 0.536±0.00
ENSMUST00000153110 4.401±1.20 3.666±0.87 3.020±0.42 2.189±0.68 4.974±1.27 1.025±0.34 1.944±0.24 1.986±0.79 0.546±0.25 1.482±0.00 2.286±0.57 2.143±0.00 3.267±1.81 0.773±0.00
ENSMUST00000156152 N/A 5.242±1.37 N/A N/A 6.631±1.61 1.126±0.04 2.056±0.00 2.108±0.54 3.705±0.00 N/A N/A 3.541±0.76 2.330±1.11 N/A

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