C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00045D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000063186-ENSDARG00000058306 CGP 7955 18:7848822-7873121
GeneTranscriptPositionBiotype
ENSDARG00000058306 (prpf18)
PRP18 pre-mRNA processing factor 18 homolog (yeast)
ENSDART00000081154 (prpf18-001) 7866732-7873121 protein_coding
ENSDARG00000063186 (BEND7)
BEN domain containing 7
ENSDART00000092094 (BEND7-201) 7848822-7866635 protein_coding
ENSDART00000136512 (BEND7-001) 7850531-7863575 protein_coding
ENSDARG00000084660 (5S_rRNA)
5S ribosomal RNA
ENSDART00000120060 (5S_rRNA.769-201) 7861812-7861928 rRNA
CIL_00045D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165626-ENSG00000165630 CGP 9606 10:13438484-13630868
GeneTranscriptPositionBiotype
ENSG00000165630 (PRPF18)
pre-mRNA processing factor 18
ENST00000320054 (PRPF18-002) 13586968-13611652 protein_coding
ENST00000378572 (PRPF18-001) 13586927-13630868 protein_coding
ENST00000417658 (PRPF18-003) 13586939-13614060 protein_coding
ENSG00000202508 (Y_RNA)
Y RNA
ENST00000365638 (Y_RNA.1-578) 13511206-13511313 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045D_0001ENSDARG00000058306ENSDART00000081154ENSDARG00000063186ENSDART00000092094ENSDART00000136512ENSDARG00000084660ENSDART00000120060CIL_00045D_0002ENSG00000165630ENST00000320054ENST00000378572ENST00000417658ENSG00000202508ENST00000365638
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045D_0001ENSDARG00000058306ENSDART00000081154ENSDARG00000063186ENSDART00000092094ENSDART00000136512ENSDARG00000084660ENSDART00000120060CIL_00045D_0002ENSG00000165630ENST00000320054ENST00000378572ENST00000417658ENSG00000202508ENST00000365638
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058306 ENSDART00000081154 N/A N/A N/A 8.226±4.34 N/A N/A 9.246±4.40 6.124±5.77 0.992±0.00 N/A 6.598±0.00 N/A N/A N/A
ENSDARG00000063186 ENSDART00000092094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A
ENSDART00000136512 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000084660 ENSDART00000120060 N/A N/A N/A N/A N/A N/A 83.747±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165630 ENST00000320054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.466±10.00 26.048±0.00 52.525±0.00
ENST00000378572 10.231±0.00 9.917±0.00 N/A N/A 10.904±0.00 7.008±3.16 4.950±0.95 7.816±4.47 7.476±1.91 4.726±0.00 3.718±0.00 11.051±3.80 9.711±4.27 20.704±4.60
ENST00000417658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.269±0.00 N/A N/A N/A
ENSG00000202508 ENST00000365638 0.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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