C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ectodysplasin-A receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003312 Edar-001 ENSMUSG00000003227 10090 - 10:58600789-58675654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003312
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003312 0.076±0.07 0.056±0.03 0.623±0.07 0.260±0.10 0.231±0.06 0.354±0.07 0.107±0.04 0.196±0.06 0.016±0.02 0.386±0.06 0.061±0.02 0.457±0.27 0.083±0.07 0.440±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RA CIL_0007RA_0002 VISTA 10:58082278-58683620
CIL_00047O CIL_00047O_0002 CGP 10:58497970-58675654

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IGI hair follicle development
GO:0004872 IEA receptor activity
GO:0005886 IDA plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042346 IDA positive regulation of NF-kappaB import into nucleus
GO:0042475 IMP odontogenesis of dentin-containing tooth
GO:0043473 IMP pigmentation
GO:0045177 IDA apical part of cell
GO:0060662 IDA salivary gland cavitation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258443 EDAR-001 protein_coding Homo_sapiens 0 1517
ENST00000376651 EDAR-201 protein_coding Homo_sapiens 0 769
ENST00000409271 EDAR-002 protein_coding Homo_sapiens 0 769

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