C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ectodysplasin A receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258443 EDAR-001 ENSG00000135960 9606 - 2:108894471-108989372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000258443
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000258443 0.139±0.00 0.075±0.00 0.014±0.00 0.131±0.09 0.029±0.00 0.090±0.09 0.124±0.04 0.016±0.01 0.065±0.04 0.039±0.01 0.106±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RA CIL_0007RA_0001 VISTA 2:108335931-108937600
CIL_00047O CIL_00047O_0001 CGP 2:108786757-108989372

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0004872 IDA receptor activity
GO:0004888 NAS transmembrane signaling receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005886 IEA plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0008544 TAS epidermis development
GO:0016021 NAS integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042346 IEA positive regulation of NF-kappaB import into nucleus
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0043473 IEA pigmentation
GO:0045177 IEA apical part of cell
GO:0060662 IEA salivary gland cavitation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003312 Edar-001 protein_coding Mus_musculus 0 1517

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