C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078179-ENSDARG00000056230 CGP 7955 2:25463828-25701802
GeneTranscriptPositionBiotype
ENSDARG00000056230 (ghsra)
growth hormone secretagogue receptor a 		ENSDART00000078695 (ghsra-001) 25699627-25701802 protein_coding
ENSDART00000150075 (ghsra-002) 25699627-25701777 protein_coding
ENSDARG00000078179 (fndc3ba)
fibronectin type III domain containing 3Ba 		ENSDART00000089108 (fndc3ba-001) 25526627-25691632 protein_coding
ENSDART00000134136 (fndc3ba-002) 25463828-25530511 retained_intron
CIL_00049P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000075420-ENSG00000121853 CGP 9606 3:172039628-172448456
GeneTranscriptPositionBiotype
ENSG00000075420 (FNDC3B)
fibronectin type III domain containing 3B 		ENST00000336824 (FNDC3B-001) 172040554-172401665 protein_coding
ENST00000415807 (FNDC3B-004) 172039628-172398771 protein_coding
ENST00000416957 (FNDC3B-003) 172046913-172397481 protein_coding
ENST00000421757 (FNDC3B-002) 172039628-172187298 protein_coding
ENST00000423424 (FNDC3B-008) 172040555-172186834 protein_coding
ENST00000443501 (FNDC3B-006) 172126974-172251456 protein_coding
ENST00000469491 (FNDC3B-005) 172039659-172338324 retained_intron
ENST00000476794 (FNDC3B-011) 172148535-172187218 processed_transcript
ENST00000478016 (FNDC3B-010) 172126973-172227263 retained_intron
ENST00000483344 (FNDC3B-012) 172306936-172310927 retained_intron
ENST00000490832 (FNDC3B-009) 172345895-172352878 retained_intron
ENST00000494000 (FNDC3B-007) 172329074-172335814 retained_intron
ENSG00000121853 (GHSR)
growth hormone secretagogue receptor 		ENST00000241256 (GHSR-001) 172445133-172448456 protein_coding
ENST00000427970 (GHSR-002) 172447544-172448455 protein_coding
ENSG00000236686 (BZW1P1)
basic leucine zipper and W2 domains 1 pseudogene 1 		ENST00000454901 (BZW1P1-001) 172425850-172427089 processed_pseudogene
ENSG00000237483 (RP11-423E7.1)
 ENST00000452665 (RP11-423E7.1-001) 172225428-172225872 processed_pseudogene
ENSG00000243398 (RN7SL141P)
RNA, 7SL, cytoplasmic 141, pseudogene 		ENST00000484215 (RN7SL141P-201) 172237326-172237591 misc_RNA
ENSG00000279862 (RP11-423E7.2)
 ENST00000623304 (RP11-423E7.2-001) 172301654-172303052 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049P_0001ENSDARG00000056230ENSDART00000078695ENSDART00000150075ENSDARG00000078179ENSDART00000089108ENSDART00000134136CIL_00049P_0002ENSG00000075420ENST00000336824ENST00000415807ENST00000416957ENST00000421757ENST00000423424ENST00000443501ENST00000469491ENST00000476794ENST00000478016ENST00000483344ENST00000490832ENST00000494000ENSG00000121853ENST00000241256ENST00000427970ENSG00000236686ENST00000454901ENSG00000237483ENST00000452665ENSG00000243398ENST00000484215ENSG00000279862ENST00000623304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049P_0001ENSDARG00000056230ENSDART00000078695ENSDART00000150075ENSDARG00000078179ENSDART00000089108CIL_00049P_0002ENSG00000075420ENST00000336824ENST00000415807ENST00000416957ENST00000443501ENSG00000121853ENST00000241256ENST00000427970ENSG00000236686ENST00000454901ENSG00000237483ENST00000452665ENSG00000243398ENST00000484215ENSG00000279862ENST00000623304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056230 ENSDART00000078695 N/A N/A N/A 0.637±0.17 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000150075 N/A N/A N/A 0.473±0.00 N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A
ENSDARG00000078179 ENSDART00000089108 N/A N/A N/A N/A N/A N/A 6.569±2.29 3.523±0.49 0.834±0.00 N/A N/A N/A N/A N/A
ENSDART00000134136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075420 ENST00000336824 N/A N/A 3.108±0.00 0.866±0.16 7.404±0.00 5.385±0.00 N/A 4.391±0.00 6.466±0.00 5.444±0.00 N/A 5.330±3.08 11.378±5.85 N/A
ENST00000415807 N/A N/A N/A 0.551±0.00 N/A N/A N/A N/A N/A N/A 1.406±0.00 0.731±0.00 2.454±0.00 N/A
ENST00000416957 N/A N/A 3.953±0.00 N/A 12.074±0.00 11.167±0.00 5.102±1.00 N/A 10.305±0.00 10.915±0.00 3.007±0.49 8.671±6.78 7.527±0.00 1.919±0.00
ENST00000421757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443501 N/A N/A N/A 7.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000121853 ENST00000241256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00
ENST00000427970 N/A N/A N/A 0.109±0.00 N/A N/A N/A N/A N/A 1.266±0.00 N/A N/A N/A 0.041±0.00
ENSG00000236686 ENST00000454901 0.009±0.00 N/A N/A 0.009±0.00 N/A 0.008±0.00 0.016±0.00 N/A 0.008±0.00 0.008±0.00 N/A 0.317±0.00 N/A 0.028±0.01
ENSG00000237483 ENST00000452665 N/A 0.055±0.00 N/A N/A N/A 0.778±0.00 N/A N/A N/A 0.170±0.00 N/A 0.206±0.00 N/A 0.049±0.00
ENSG00000243398 ENST00000484215 N/A N/A N/A N/A 0.150±0.00 0.280±0.00 0.466±0.00 N/A 0.845±0.00 N/A N/A N/A N/A N/A
ENSG00000279862 ENST00000623304 0.170±0.00 N/A 0.441±0.00 0.033±0.03 0.025±0.00 N/A 0.135±0.03 N/A N/A 0.143±0.00 N/A 0.096±0.01 0.051±0.03 0.020±0.01

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