C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054087-ENSDARG00000021046 CGP 7955 15:35156389-35212742
GeneTranscriptPositionBiotype
ENSDARG00000021046 (rhbdd1)
rhomboid domain containing 1 		ENSDART00000019976 (rhbdd1-001) 35200934-35212742 protein_coding
ENSDARG00000054087 (irs1)
insulin receptor substrate 1 		ENSDART00000076229 (irs1-001) 35156389-35197910 protein_coding
CIL_0004AO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169047-ENSG00000144468 CGP 9606 2:226731317-226999215
GeneTranscriptPositionBiotype
ENSG00000144468 (RHBDD1)
rhomboid domain containing 1 		ENST00000341329 (RHBDD1-001) 226835936-226999215 protein_coding
ENST00000392062 (RHBDD1-201) 226835955-226999201 protein_coding
ENST00000409053 (RHBDD1-011) 226906712-226988498 protein_coding
ENST00000423616 (RHBDD1-005) 226836050-226867206 protein_coding
ENST00000424132 (RHBDD1-004) 226835581-226865097 protein_coding
ENST00000436481 (RHBDD1-006) 226837548-226864856 protein_coding
ENST00000437454 (RHBDD1-002) 226836034-226864844 protein_coding
ENST00000443477 (RHBDD1-003) 226836044-226864711 protein_coding
ENST00000448992 (RHBDD1-008) 226836056-226865065 protein_coding
ENST00000450679 (RHBDD1-007) 226837524-226839607 processed_transcript
ENST00000473218 (RHBDD1-012) 226906851-226914637 retained_intron
ENST00000483268 (RHBDD1-013) 226935199-226995675 processed_transcript
ENST00000491490 (RHBDD1-009) 226906747-226995755 retained_intron
ENST00000493526 (RHBDD1-010) 226908221-226995901 processed_transcript
ENST00000539613 (RHBDD1-014) 226836082-226839626 processed_transcript
ENSG00000169047 (IRS1)
insulin receptor substrate 1 		ENST00000305123 (IRS1-001) 226731317-226799759 protein_coding
ENST00000498335 (IRS1-002) 226792138-226795246 processed_transcript
ENSG00000212391 (SNORA48)
Small nucleolar RNA SNORA48 		ENST00000391089 (SNORA48.1-205) 226968989-226969122 snoRNA
ENSG00000261379 (RP11-395N3.1)
 ENST00000567305 (RP11-395N3.1-001) 226804036-226805061 sense_intronic
ENSG00000272622 (RP11-395N3.2)
 ENST00000607970 (RP11-395N3.2-001) 226800146-226811029 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AO_0001ENSDARG00000021046ENSDART00000019976ENSDARG00000054087ENSDART00000076229CIL_0004AO_0002ENSG00000144468ENST00000341329ENST00000392062ENST00000409053ENST00000423616ENST00000424132ENST00000436481ENST00000437454ENST00000443477ENST00000448992ENST00000450679ENST00000473218ENST00000483268ENST00000491490ENST00000493526ENST00000539613ENSG00000169047ENST00000305123ENST00000498335ENSG00000212391ENST00000391089ENSG00000261379ENST00000567305ENSG00000272622ENST00000607970
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AO_0001ENSDARG00000021046ENSDART00000019976ENSDARG00000054087ENSDART00000076229CIL_0004AO_0002ENSG00000144468ENST00000341329ENST00000392062ENST00000409053ENST00000491490ENSG00000169047ENST00000305123ENSG00000212391ENST00000391089ENSG00000261379ENST00000567305ENSG00000272622ENST00000607970
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021046 ENSDART00000019976 N/A N/A N/A 1.436±0.92 N/A N/A 4.716±0.35 3.934±0.50 0.568±0.00 N/A 3.053±0.00 N/A N/A N/A
ENSDARG00000054087 ENSDART00000076229 N/A N/A N/A 1.960±1.14 N/A N/A 10.936±1.41 0.835±0.11 0.283±0.00 N/A 4.594±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144468 ENST00000341329 2.841±0.00 1.965±0.00 1.247±0.00 1.201±0.00 1.932±0.49 1.234±0.00 0.975±0.00 2.518±0.00 1.371±0.00 1.953±0.00 0.822±0.00 1.710±0.78 2.152±0.42 2.230±0.35
ENST00000392062 N/A N/A 0.925±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 N/A 2.896±0.00
ENST00000409053 N/A N/A N/A N/A 9.653±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491490 N/A N/A N/A N/A N/A N/A N/A 2.491±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169047 ENST00000305123 1.518±0.00 0.952±0.00 1.163±0.00 0.843±0.24 3.861±0.91 2.105±1.03 1.471±0.95 2.411±0.43 2.310±0.92 1.793±0.98 2.242±1.21 4.879±3.36 3.857±0.81 0.853±0.56
ENST00000498335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212391 ENST00000391089 N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A 0.154±0.00 1.277±0.00 N/A N/A N/A N/A
ENSG00000261379 ENST00000567305 0.010±0.00 0.155±0.00 0.107±0.00 0.010±0.00 0.575±0.44 0.233±0.00 N/A 0.049±0.00 0.140±0.00 0.038±0.01 N/A 0.254±0.13 0.045±0.00 N/A
ENSG00000272622 ENST00000607970 0.080±0.00 0.055±0.00 N/A 0.288±0.16 0.294±0.04 0.102±0.00 0.255±0.00 0.167±0.00 0.553±0.33 0.309±0.00 0.265±0.00 1.215±0.80 0.707±0.31 0.371±0.04

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