C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor receptor superfamily, member 13c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109535 Tnfrsf13c-202 ENSMUSG00000068105 10090 - 15:82221745-82224339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000109535
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000109535 0.040±0.03 0.027±0.00 0.011±0.00 4.841±0.06 0.254±0.03 0.028±0.00 0.105±0.07 0.086±0.06 0.399±0.10 0.051±0.00 0.136±0.04 3.220±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BF CIL_0004BF_0002 CGP 15:82206952-82224339
CIL_0004BG CIL_0004BG_0002 CGP 15:82221744-82244747

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001782 IMP B cell homeostasis
GO:0002636 IMP positive regulation of germinal center formation
GO:0009897 IDA external side of plasma membrane
GO:0016021 ISO integral component of membrane
GO:0030890 IDA positive regulation of B cell proliferation
GO:0031295 IDA T cell costimulation
GO:0031296 IDA B cell costimulation
GO:0042102 IDA positive regulation of T cell proliferation
GO:0045078 IMP positive regulation of interferon-gamma biosynthetic process
GO:0050776 IMP regulation of immune response

Homologs

No Homologs available.

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