C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004CJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139508-ENSG00000132938 CGP 9606 13:28700064-29505947
GeneTranscriptPositionBiotype
ENSG00000132938 (MTUS2)
microtubule associated tumor suppressor candidate 2 		ENST00000255289 (MTUS2-005) 29071984-29281770 processed_transcript
ENST00000380808 (MTUS2-001) 29428627-29503736 protein_coding
ENST00000400542 (MTUS2-003) 29496347-29503140 processed_transcript
ENST00000431530 (MTUS2-201) 29024611-29505946 protein_coding
ENST00000467990 (MTUS2-004) 29496416-29497789 retained_intron
ENST00000542829 (MTUS2-202) 29428709-29503257 protein_coding
ENST00000612955 (MTUS2-002) 28820348-29505947 protein_coding
ENSG00000139508 (SLC46A3)
solute carrier family 46, member 3 		ENST00000266943 (SLC46A3-003) 28700080-28718841 protein_coding
ENST00000380814 (SLC46A3-001) 28700717-28718970 protein_coding
ENST00000475385 (SLC46A3-002) 28700064-28704557 processed_transcript
ENSG00000179141 (MTUS2-AS1)
MTUS2 antisense RNA 1 		ENST00000323380 (MTUS2-AS1-001) 29476515-29490105 antisense
ENST00000587588 (MTUS2-AS1-002) 29482120-29487517 antisense
ENSG00000202237 (RNU6-53P)
RNA, U6 small nuclear 53, pseudogene 		ENST00000365367 (RNU6-53P-201) 28703702-28703807 snRNA
ENSG00000223460 (GAPDHP69)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 69 		ENST00000425504 (GAPDHP69-001) 29306778-29307785 processed_pseudogene
ENSG00000233588 (CYP51A1P2)
cytochrome P450, family 51, subfamily A, polypeptide 1 pseudogene 2 		ENST00000419457 (CYP51A1P2-001) 28722386-28724021 processed_pseudogene
ENSG00000236758 (MTUS2-AS2)
MTUS2 antisense RNA 2 		ENST00000417624 (MTUS2-AS2-002) 29239623-29250554 antisense
ENST00000434779 (MTUS2-AS2-003) 29239379-29250554 antisense
ENST00000452602 (MTUS2-AS2-001) 29239787-29250554 antisense
ENSG00000270680 (RP11-351N4.4)
 ENST00000605701 (RP11-351N4.4-001) 29339566-29339869 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0004CJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029650-ENSMUSG00000029651 CGP 10090 5:147878437-148316065
GeneTranscriptPositionBiotype
ENSMUSG00000029650 (Slc46a3)
solute carrier family 46, member 3 		ENSMUST00000031655 (Slc46a3-002) 147878441-147894815 protein_coding
ENSMUST00000118527 (Slc46a3-001) 147878437-147894815 protein_coding
ENSMUST00000138244 (Slc46a3-003) 147893881-147894815 protein_coding
ENSMUST00000152064 (Slc46a3-004) 147878559-147879869 retained_intron
ENSMUSG00000029651 (Mtus2)
microtubule associated tumor suppressor candidate 2 		ENSMUST00000071878 (Mtus2-004) 148265288-148313734 protein_coding
ENSMUST00000085554 (Mtus2-007) 148303174-148314000 protein_coding
ENSMUST00000085558 (Mtus2-001) 147957320-148316065 protein_coding
ENSMUST00000110514 (Mtus2-005) 148265345-148314038 protein_coding
ENSMUST00000110515 (Mtus2-003) 148265217-148314071 protein_coding
ENSMUST00000128423 (Mtus2-010) 148094256-148204008 processed_transcript
ENSMUST00000129092 (Mtus2-009) 147957342-148076537 protein_coding
ENSMUST00000146425 (Mtus2-006) 148265292-148313552 nonsense_mediated_decay
ENSMUST00000149336 (Mtus2-002) 148082888-148233624 retained_intron
ENSMUST00000152105 (Mtus2-008) 148303165-148313460 protein_coding
ENSMUSG00000066554 (Gm10167)
predicted pseudogene 10167 		ENSMUST00000150411 (Gm10167-001) 148182899-148184377 processed_pseudogene
ENSMUSG00000085565 (Gm15721)
predicted gene 15721 		ENSMUST00000138406 (Gm15721-001) 147949882-147957166 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CJ_0001ENSG00000132938ENST00000255289ENST00000380808ENST00000400542ENST00000431530ENST00000467990ENST00000542829ENST00000612955ENSG00000139508ENST00000266943ENST00000380814ENST00000475385ENSG00000179141ENST00000323380ENST00000587588ENSG00000202237ENST00000365367ENSG00000223460ENST00000425504ENSG00000233588ENST00000419457ENSG00000236758ENST00000417624ENST00000434779ENST00000452602ENSG00000270680ENST00000605701CIL_0004CJ_0002ENSMUSG00000029650ENSMUST00000031655ENSMUST00000118527ENSMUST00000138244ENSMUST00000152064ENSMUSG00000029651ENSMUST00000071878ENSMUST00000085554ENSMUST00000085558ENSMUST00000110514ENSMUST00000110515ENSMUST00000128423ENSMUST00000129092ENSMUST00000146425ENSMUST00000149336ENSMUST00000152105ENSMUSG00000066554ENSMUST00000150411ENSMUSG00000085565ENSMUST00000138406
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004CJ_0001ENSG00000132938ENST00000255289ENST00000380808ENST00000400542ENST00000431530ENST00000542829ENST00000612955ENSG00000139508ENST00000266943ENST00000380814ENST00000475385ENSG00000179141ENST00000323380ENSG00000202237ENST00000365367ENSG00000223460ENST00000425504ENSG00000233588ENST00000419457ENSG00000236758ENST00000417624ENST00000434779ENST00000452602ENSG00000270680ENST00000605701CIL_0004CJ_0002ENSMUSG00000029650ENSMUST00000031655ENSMUST00000118527ENSMUST00000152064ENSMUSG00000029651ENSMUST00000071878ENSMUST00000085554ENSMUST00000085558ENSMUST00000110515ENSMUST00000129092ENSMUST00000146425ENSMUST00000152105ENSMUSG00000066554ENSMUST00000150411ENSMUSG00000085565ENSMUST00000138406
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132938 ENST00000255289 N/A N/A N/A N/A N/A N/A N/A 0.629±0.00 N/A N/A N/A N/A 0.164±0.00 N/A
ENST00000380808 N/A N/A N/A N/A N/A N/A 7.134±0.00 N/A 0.089±0.00 N/A N/A 0.564±0.49 N/A N/A
ENST00000400542 N/A N/A 0.303±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A
ENST00000431530 0.002±0.00 N/A N/A 0.989±0.25 N/A 0.136±0.06 N/A 0.029±0.00 0.097±0.00 0.179±0.00 0.008±0.00 0.034±0.03 0.067±0.00 0.448±0.00
ENST00000467990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.498±0.20 N/A N/A
ENST00000612955 N/A N/A N/A 0.838±0.54 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A 0.742±0.22
ENSG00000139508 ENST00000266943 2.263±0.00 3.324±0.00 0.986±0.00 1.285±0.00 3.244±1.56 3.161±0.94 2.566±1.32 4.326±0.00 7.488±6.33 1.924±0.70 0.755±0.31 3.621±1.56 2.318±0.13 4.154±1.76
ENST00000380814 N/A N/A N/A 0.399±0.00 1.068±0.00 N/A 0.569±0.00 N/A N/A N/A 1.309±0.00 2.402±0.00 N/A N/A
ENST00000475385 N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A 1.472±0.28 0.481±0.00 N/A
ENSG00000179141 ENST00000323380 N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A
ENST00000587588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202237 ENST00000365367 0.395±0.00 N/A N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A N/A 2.373±0.00 N/A N/A
ENSG00000223460 ENST00000425504 0.048±0.00 0.487±0.00 N/A 0.429±0.38 0.633±0.00 0.674±0.00 0.133±0.00 0.472±0.00 0.043±0.00 0.678±0.00 1.051±0.00 0.320±0.00 N/A 0.033±0.02
ENSG00000233588 ENST00000419457 0.016±0.00 0.064±0.00 N/A 0.023±0.00 0.023±0.00 0.036±0.00 0.007±0.00 0.033±0.02 0.088±0.00 0.152±0.00 N/A 0.061±0.05 0.065±0.00 0.071±0.06
ENSG00000236758 ENST00000417624 N/A N/A N/A 0.021±0.00 N/A N/A 0.098±0.00 N/A N/A N/A N/A 0.091±0.00 N/A N/A
ENST00000434779 N/A N/A N/A 0.409±0.00 N/A N/A 0.209±0.19 N/A N/A N/A N/A 0.019±0.00 N/A 0.055±0.03
ENST00000452602 N/A N/A N/A 0.050±0.03 N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A 0.085±0.00
ENSG00000270680 ENST00000605701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029650 ENSMUST00000031655 3.150±0.75 9.074±1.24 5.231±0.54 0.667±0.05 6.098±3.25 2.944±0.86 1.299±0.10 4.189±1.26 8.601±4.92 5.296±0.46 2.323±0.59 2.077±0.87 0.753±0.54 0.671±0.43
ENSMUST00000118527 1.271±0.00 3.026±0.62 2.340±0.33 0.432±0.13 5.128±2.57 1.366±0.45 0.782±0.00 N/A 2.869±0.96 1.842±0.28 1.166±0.33 2.165±1.83 0.820±0.55 0.318±0.07
ENSMUST00000138244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152064 4.418±2.81 11.749±1.53 N/A 0.812±0.45 17.439±6.71 5.683±0.94 2.899±0.95 5.134±1.53 9.370±4.76 6.880±1.63 N/A 6.998±1.91 0.736±0.33 0.531±0.33
ENSMUSG00000029651 ENSMUST00000071878 N/A 1.714±0.54 N/A N/A 0.749±0.16 2.292±0.32 N/A 0.213±0.02 N/A 1.546±0.00 N/A 1.439±0.37 N/A 0.391±0.00
ENSMUST00000085554 N/A 1.822±0.00 N/A N/A 0.689±0.00 N/A N/A 0.191±0.00 0.354±0.13 N/A 0.051±0.01 3.719±1.20 1.485±1.31 N/A
ENSMUST00000085558 N/A N/A 0.280±0.00 3.462±2.30 0.085±0.05 N/A N/A 0.020±0.00 N/A N/A 0.018±0.01 0.188±0.01 0.069±0.00 0.223±0.09
ENSMUST00000110514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.01 0.887±0.19 N/A N/A
ENSMUST00000128423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 N/A N/A N/A
ENSMUST00000146425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00
ENSMUST00000149336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152105 N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.07 N/A 0.126±0.02 3.992±0.00 15.062±3.16 2.475±0.00
ENSMUSG00000066554 ENSMUST00000150411 3.279±1.56 6.328±0.59 0.048±0.01 0.105±0.02 3.702±0.45 0.167±0.13 1.236±0.37 1.123±0.50 0.371±0.45 0.160±0.07 N/A 0.281±0.31 0.153±0.13 0.428±0.33
ENSMUSG00000085565 ENSMUST00000138406 N/A 0.021±0.00 0.030±0.02 0.096±0.02 0.019±0.01 0.040±0.00 0.014±0.01 N/A 0.007±0.00 0.025±0.01 0.012±0.00 0.017±0.01 0.011±0.00 0.006±0.00

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