C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004CK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165556-ENSG00000183463 CGP 9606 13:27962137-27988654
GeneTranscriptPositionBiotype
ENSG00000165556 (CDX2)
caudal type homeobox 2 		ENST00000381020 (CDX2-001) 27962137-27971139 protein_coding
ENST00000548877 (CDX2-002) 27963004-27967325 processed_transcript
ENSG00000183463 (URAD)
ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase 		ENST00000332715 (URAD-001) 27977714-27988654 protein_coding
CIL_0004CK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029646-ENSMUSG00000075543 CGP 10090 5:147300805-147322440
GeneTranscriptPositionBiotype
ENSMUSG00000029646 (Cdx2)
caudal type homeobox 2 		ENSMUST00000031650 (Cdx2-001) 147300805-147307270 protein_coding
ENSMUSG00000075543 (Urad)
ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5) decarboxylase 		ENSMUST00000100433 (Urad-001) 147314984-147322440 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBreastColonLiverLungOvaryPlacentaTestisCIL_0004CK_0001ENSG00000165556ENST00000381020ENST00000548877ENSG00000183463ENST00000332715CIL_0004CK_0002ENSMUSG00000029646ENSMUST00000031650ENSMUSG00000075543ENSMUST00000100433
Region; Gene Transcript'; AdiposeAdrenalBladderBreastColonLiverLungOvaryPlacentaTestisCIL_0004CK_0001ENSG00000165556ENST00000381020ENST00000548877ENSG00000183463ENST00000332715CIL_0004CK_0002ENSMUSG00000029646ENSMUST00000031650ENSMUSG00000075543ENSMUST00000100433
Gene Transcript Adipose Adrenal Bladder Breast Colon Liver Lung Ovary Placenta Testis
ENSG00000165556 ENST00000381020 N/A 0.025±0.00 N/A 1.280±1.25 3.518±2.09 N/A 0.055±0.00 1.642±0.83 0.011±0.00 0.021±0.00
ENST00000548877 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A 0.107±0.00
ENSG00000183463 ENST00000332715 0.128±0.00 N/A N/A 11.894±0.00 5.097±0.00 N/A N/A 0.085±0.00 0.116±0.00 0.131±0.03
Gene Transcript Adipose Adrenal Bladder Breast Colon Liver Lung Ovary Placenta Testis
ENSMUSG00000029646 ENSMUST00000031650 N/A 0.033±0.01 0.012±0.00 N/A 113.978±21.87 0.030±0.03 0.235±0.16 0.044±0.01 7.654±4.72 0.033±0.01
ENSMUSG00000075543 ENSMUST00000100433 N/A 1.148±0.37 N/A 0.307±0.17 0.481±0.29 33.821±25.05 N/A 0.281±0.09 0.008±0.00 N/A

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