C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: caudal type homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548877 CDX2-002 ENSG00000165556 9606 - 13:27963004-27967325 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000548877
Transcript ID Breast Testis
ENST00000548877 0.069±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CO CIL_0008CO_0001 VISTA 13:27444442-28045997
CIL_0007MT CIL_0007MT_0001 UCNEbase 13:27505095-28294517
CIL_00082E CIL_00082E_0001 VISTA 13:27521824-28123399
CIL_0004CK CIL_0004CK_0001 CGP 13:27962137-27988654

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031650 Cdx2-001 protein_coding Mus_musculus 0 514

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