C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090673-ENSDARG00000021812 CGP 7955 22:4589134-4631128
GeneTranscriptPositionBiotype
ENSDARG00000021812 (cherp)
calcium homeostasis endoplasmic reticulum protein 		ENSDART00000028634 (cherp-001) 4603581-4631128 protein_coding
ENSDART00000125265 (cherp-002) 4624754-4631125 protein_coding
ENSDARG00000090673 (C22H19orf44)
chromosome 19 open reading frame 44 		ENSDART00000122324 (C22H19orf44-201) 4589281-4603910 protein_coding
ENSDART00000135639 (C22H19orf44-001) 4589134-4598973 protein_coding
CIL_0004DY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105072-ENSG00000085872 CGP 9606 19:16496311-16542530
GeneTranscriptPositionBiotype
ENSG00000085872 (CHERP)
calcium homeostasis endoplasmic reticulum protein 		ENST00000198939 (CHERP-003) 16517896-16542415 protein_coding
ENST00000544299 (CHERP-005) 16518957-16526274 processed_transcript
ENST00000546361 (CHERP-001) 16517889-16542530 protein_coding
ENST00000546538 (CHERP-004) 16531984-16542209 retained_intron
ENST00000551747 (CHERP-006) 16541205-16542400 retained_intron
ENST00000597261 (CHERP-008) 16518884-16519825 retained_intron
ENST00000600432 (CHERP-007) 16519904-16520873 retained_intron
ENSG00000240106 (RN7SL146P)
RNA, 7SL, cytoplasmic 146, pseudogene 		ENST00000472338 (RN7SL146P-201) 16539688-16539984 misc_RNA
CIL_0004DY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052794-ENSMUSG00000052488 CGP 10090 8:72443880-72475233
GeneTranscriptPositionBiotype
ENSMUSG00000052488 (Cherp)
calcium homeostasis endoplasmic reticulum protein 		ENSMUST00000079510 (Cherp-201) 72460489-72475233 protein_coding
ENSMUSG00000052794 (1700030K09Rik)
RIKEN cDNA 1700030K09 gene 		ENSMUST00000064853 (1700030K09Rik-001) 72443880-72461001 protein_coding
ENSMUST00000121902 (1700030K09Rik-002) 72443932-72460641 protein_coding
ENSMUST00000139130 (1700030K09Rik-003) 72457890-72458651 retained_intron
ENSMUSG00000099079 (Mir7068)
microRNA 7068 		ENSMUST00000183439 (Mir7068-201) 72470016-72470089 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DY_0001ENSDARG00000021812ENSDART00000028634ENSDART00000125265ENSDARG00000090673ENSDART00000122324ENSDART00000135639CIL_0004DY_0002ENSG00000085872ENST00000198939ENST00000544299ENST00000546361ENST00000546538ENST00000551747ENST00000597261ENST00000600432ENSG00000240106ENST00000472338CIL_0004DY_0003ENSMUSG00000052488ENSMUST00000079510ENSMUSG00000052794ENSMUST00000064853ENSMUST00000121902ENSMUST00000139130ENSMUSG00000099079ENSMUST00000183439
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DY_0001ENSDARG00000021812ENSDART00000028634ENSDARG00000090673ENSDART00000122324CIL_0004DY_0002ENSG00000085872ENST00000198939ENST00000546361ENSG00000240106ENST00000472338CIL_0004DY_0003ENSMUSG00000052488ENSMUST00000079510ENSMUSG00000052794ENSMUST00000064853ENSMUST00000121902ENSMUSG00000099079ENSMUST00000183439
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021812 ENSDART00000028634 N/A N/A N/A 3.450±1.01 N/A N/A 3.135±1.91 5.088±0.00 0.459±0.00 N/A N/A N/A N/A N/A
ENSDART00000125265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000090673 ENSDART00000122324 N/A N/A N/A 1.626±0.91 N/A N/A 1.473±0.00 1.417±0.47 N/A N/A 1.004±0.00 N/A N/A N/A
ENSDART00000135639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085872 ENST00000198939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.205±0.00 19.982±0.00 9.469±0.00 N/A
ENST00000544299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546361 N/A N/A 1.613±0.00 16.853±0.00 17.457±0.00 21.214±0.00 10.355±0.00 N/A N/A 2.028±0.00 N/A 42.180±16.04 12.049±1.80 30.195±0.00
ENST00000546538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240106 ENST00000472338 N/A 0.397±0.00 N/A 0.093±0.00 N/A 0.775±0.07 0.078±0.00 0.085±0.00 0.226±0.00 N/A N/A 0.170±0.00 N/A 0.165±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052488 ENSMUST00000079510 12.939±2.76 18.107±2.17 11.953±1.23 18.510±10.30 13.469±6.46 11.448±1.72 6.650±2.16 9.551±1.30 11.424±7.25 11.532±1.70 5.129±1.26 15.714±4.73 18.520±7.49 17.313±4.91
ENSMUSG00000052794 ENSMUST00000064853 5.021±0.03 N/A 3.666±0.33 5.546±0.00 1.473±0.00 N/A 0.922±0.00 N/A 1.521±0.00 4.432±0.00 0.905±0.12 10.799±0.00 N/A 8.868±1.83
ENSMUST00000121902 3.814±0.00 N/A N/A N/A 3.168±0.80 N/A 0.952±0.00 N/A N/A N/A 1.223±0.01 5.241±1.83 N/A N/A
ENSMUST00000139130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099079 ENSMUST00000183439 N/A N/A N/A N/A N/A N/A 45625.500±0.00 43701.500±0.00 N/A N/A N/A 51878.602±0.00 N/A 35606.699±0.00

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